Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  534 bits (1376), Expect = e-156
 Identities = 273/422 (64%), Positives = 342/422 (81%), Gaps = 2/422 (0%)

Query: 1   MDDISTGILFALLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPD 60
           M+ IST +L  +L  LIIISAYFSGSET MM+LNRYRL+HLAN+GHKGAKR  +LL+RPD
Sbjct: 1   MEAISTSVLVIILFVLIIISAYFSGSETAMMSLNRYRLRHLANNGHKGAKRAIRLLERPD 60

Query: 61  RLIGLILIGNNLVNILASAIATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAALY 120
           RLIGLILIGNNLVNILASAIATI+G+RL+GD+GVAIATG LTLV+LVFAEVTPKT+AAL+
Sbjct: 61  RLIGLILIGNNLVNILASAIATILGIRLFGDVGVAIATGVLTLVVLVFAEVTPKTVAALH 120

Query: 121 PERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTVVNE 180
           PER+++ SSVLL  L+ LLSPLV  VN +T+  +R+LGI       D LS EELRTVV+E
Sbjct: 121 PERIAFPSSVLLKALLVLLSPLVKIVNFITSTFLRLLGIRSVKA-DDALSQEELRTVVHE 179

Query: 181 AGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPHGRVVL 240
           AG LIP+RHQ+MLLSI+DLE VTV DIMIPR+++  IN+NDD+  I +Q++ SPH RV+L
Sbjct: 180 AGALIPQRHQEMLLSIMDLEKVTVEDIMIPRSDLYAINVNDDFSRINKQVIQSPHTRVLL 239

Query: 241 YRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKFQRNKE 300
           YRD ID+ VG + LR+A R +  K  F+K  LLRA  EIYFIPEGTPLNVQL  FQ+NKE
Sbjct: 240 YRDNIDDAVGFVHLRDALR-LQSKQQFSKSSLLRAVKEIYFIPEGTPLNVQLANFQQNKE 298

Query: 301 RIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGSANIRDI 360
           RIGL+VDEYG+I GL TLEDILEEIVG+FTTSM  + +++I  Q DGSFLI+ + NIRD+
Sbjct: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMITTPSEDINQQQDGSFLIDATINIRDL 358

Query: 361 NKSLKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRIKLVKVYPRK 420
           NK + W  P DGP+TLNGLILE+LEEIP  + S++++ + +E++E+ +N +K V+V P+ 
Sbjct: 359 NKEMDWHFPIDGPKTLNGLILEYLEEIPEPNTSMRLSGYPLEVVEVADNMVKTVRVMPQH 418

Query: 421 TK 422
            K
Sbjct: 419 YK 420