Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (375), Expect = 2e-40
 Identities = 108/424 (25%), Positives = 213/424 (50%), Gaps = 29/424 (6%)

Query: 12  LLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPDRLIGLILIGNN 71
           +L  LI+++  F+ SE  ++   + RL  LA++G   AK   KL + P + +  + IG  
Sbjct: 5   ILIGLIVLNGLFAMSEIAIVTARKSRLTALAHAGSSTAKAALKLAEDPTQFLSTVQIGIT 64

Query: 72  LVNIL-----ASAIATIIGMRLY---------GDLGVAIATGALTLVILVFAEVTPKTLA 117
            + IL      S +A  + + L                +    +T V +V  E+ PK + 
Sbjct: 65  SIGILNGIFGESILAEPLSLWLQTFGLSPDVTNIFSTVLVVIIVTYVSIVIGELVPKRIG 124

Query: 118 ALYPERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTV 177
            +  E ++   +  +  L     P V  ++  T+ L+R++G S  H   D+++ E+++ +
Sbjct: 125 QVSAESIACIMAKPMVFLAIATKPFVWMLSGSTHALMRLMGFS--HRLDDNVTQEDIQAM 182

Query: 178 VNE--AGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPH 235
           + E  + G+I      M+ ++  L+  T++ +M+PR++I  +++N    + +R ++ SPH
Sbjct: 183 LQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPH 242

Query: 236 GRVVLYRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKF 295
            R  + R+ +D++VGI+    A + + E     +  L+       F+P        L  F
Sbjct: 243 SRFPVCRNNVDDMVGII---SAKQLLSESIAGERLELVDLVKNCNFVPNSLSGMELLEHF 299

Query: 296 QRNKERIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADE-ITPQGDGSFLIEGS 354
           +    ++  +VDEYG++ GL TL+D+++ + GEF       + D+ +  + DGS L++G 
Sbjct: 300 RTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEF---FQEDVNDQMVIKREDGSLLLDGL 356

Query: 355 ANIRDINKSLKWK-LPTDGP---RTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENR 410
             I D+  +L  K LP +     +TLNG ++  L +IP +   V+VA  ++EI++++  R
Sbjct: 357 IPIFDLKDALGIKQLPNEEDGRYQTLNGFLMYELGKIPQTTDIVEVAGWRLEIMDMDGKR 416

Query: 411 IKLV 414
           +  V
Sbjct: 417 VDKV 420