Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  521 bits (1342), Expect = e-152
 Identities = 264/419 (63%), Positives = 333/419 (79%), Gaps = 2/419 (0%)

Query: 1   MDDISTGILFALLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPD 60
           MD IST  L   L  LI+ SAYFSGSET MM LNRYRL+HLA++GHKGA R  KLL+RPD
Sbjct: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60

Query: 61  RLIGLILIGNNLVNILASAIATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAALY 120
           RLIGLILIGNNLVNILA++IATIIGMRL+GDLGVAIA+G LTLV+LVF EVTPKT+AAL 
Sbjct: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120

Query: 121 PERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTVVNE 180
           PER+++ SS LL  L K+ + +V  VN +T G++R++GI       D LS EELRTVV+E
Sbjct: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIK-SISSSDALSKEELRTVVHE 179

Query: 181 AGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPHGRVVL 240
           AG LIP+RHQ+MLLSILDLE VTV DIM+PR++I  IN+NDD+K I RQ++ SPH RV++
Sbjct: 180 AGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLV 239

Query: 241 YRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKFQRNKE 300
           YRD ID+ VG + LR+A R +  K  F+K  LLRA  E+YFIPEGTPLNVQL  FQ NKE
Sbjct: 240 YRDTIDDAVGFIHLRDALR-LQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298

Query: 301 RIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGSANIRDI 360
           RIGL+VDEYG+I GL TLEDILEEIVG+FTTSM  + +++I  Q DGS+L+  S  IRD+
Sbjct: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDL 358

Query: 361 NKSLKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRIKLVKVYPR 419
           NK +KW  PTDGP+TLNGLILE+LE+IP+ + S+++A + +E++E+ +N +K V++ P+
Sbjct: 359 NKEMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRIIPQ 417