Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  526 bits (1356), Expect = e-154
 Identities = 268/419 (63%), Positives = 335/419 (79%), Gaps = 2/419 (0%)

Query: 1   MDDISTGILFALLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPD 60
           MD IST  L   L  LI+ SAYFSGSET MM LNRYRL+HLA++GHKGA R  KLL+RPD
Sbjct: 1   MDAISTSALLIFLLVLILCSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60

Query: 61  RLIGLILIGNNLVNILASAIATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAALY 120
           RLIGLILIGNNLVNILASAIATIIGMRL+GDLGVA+ATG LTLV+LVFAEVTPKT+AAL 
Sbjct: 61  RLIGLILIGNNLVNILASAIATIIGMRLWGDLGVAVATGVLTLVVLVFAEVTPKTIAALN 120

Query: 121 PERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTVVNE 180
           PER+++ SS+LL  L  + + +V  VN +T G++R+ GI       D LS EELRTVV+E
Sbjct: 121 PERIAFPSSILLIGLSTIFAYVVTSVNWITTGILRLFGIK-TISSSDALSQEELRTVVHE 179

Query: 181 AGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPHGRVVL 240
           AG LIP+RHQ+MLLSILDLE VTV DIM+PR++I  IN+NDD+K I RQ++ SPH RV++
Sbjct: 180 AGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLV 239

Query: 241 YRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKFQRNKE 300
           YRD ID+ VG + LR+A R +  K  F+K  LLRA  E+YFIPEGTPLNVQL  FQ NKE
Sbjct: 240 YRDTIDDAVGFIHLRDALR-LQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298

Query: 301 RIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGSANIRDI 360
           RIGL+VDEYG+I GL TLEDILEEIVG+FTTSM  + +++IT Q DGS+L++ S  IRD+
Sbjct: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDITAQQDGSYLVDASITIRDL 358

Query: 361 NKSLKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRIKLVKVYPR 419
           NK +KW  PTDGP+TLNGLILE+LE+IPA + S+++A + +E++E+ +N +K V++ P+
Sbjct: 359 NKEMKWDFPTDGPKTLNGLILEYLEDIPAENTSLRLAGYPLEVIEVADNMVKTVRIIPQ 417