Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (310), Expect = 7e-33
 Identities = 93/420 (22%), Positives = 198/420 (47%), Gaps = 29/420 (6%)

Query: 12  LLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPDRLIGLILIGNN 71
           ++ CLI  S +FS SE  + A  + RL+ LA+ G   A++V +L  +P     ++ IG N
Sbjct: 9   IILCLIGASCFFSMSEIALAASRKIRLRQLADEGDSRAEKVLQLQAQPGSFFTVVQIGLN 68

Query: 72  LVNILASAIATIIGMRLY--------------GDLGVAIATGALTLVILVFAEVTPKTLA 117
            V I+   +      R Y                L   ++   +T   ++ A++ PK +A
Sbjct: 69  AVAIMGGIVGE-SAFRPYFYQFLSAWLSDPWLSQLSFFLSFFVVTSAFILVADLMPKRIA 127

Query: 118 ALYPERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTV 177
              PE V+      ++  + +L PLV F N M +G+ ++L I     + D ++ +++  V
Sbjct: 128 MAMPESVALVVVGPMSFCIAILRPLVWFFNGMASGIFKLLQIPTV--RNDEITPDDIYAV 185

Query: 178 VNEA--GGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPH 235
           +N     G++ +  Q M+ ++ +++ V+V   M  R  +    + D  + I R++   PH
Sbjct: 186 MNAGAEAGVLDKGEQQMIENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDPH 245

Query: 236 GRVVLYRDKIDEVVGILRLREASRFML--EKNDFNKEMLLRAADEIYFIPEGTPLNVQLL 293
            + ++   ++D V G +  +E    ++  EK       L+  +     IP+   L+  + 
Sbjct: 246 TKFLVCDGQLDMVKGFVDAKELLIRVINGEKITLKDNSLVHTS---LIIPDTLSLSEAME 302

Query: 294 KFQRNKERIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEG 353
            F+ ++    ++++EY  ++G+ T  D+   ++G ++   S    ++I  +   S+L++G
Sbjct: 303 YFKNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWSLHES---EEQIIARDGNSWLVDG 359

Query: 354 SANIRDINKSLK-WKLP-TDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRI 411
              I D+ ++    + P      T+ G ++  L +IP     V  A +K E+++++  ++
Sbjct: 360 VTPITDVMRAFDIEEFPHNQNYETIAGFMMYMLRKIPKRTDFVNYAGYKFEVVDIDAYKV 419