Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 873 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 548/872 (62%), Positives = 654/872 (75%), Gaps = 17/872 (1%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           M + E+R AFL FFE +GH  V SSSL+P NDPTLLFTNAGMNQFKDCFLG EKRAYTRA
Sbjct: 1   MKSAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA 60

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDV--LQ 120
            ++Q+CVRAGGKHNDLENVG+TARHHTFFEMLGNFSFGDYFK DAI +AW FLT    L 
Sbjct: 61  VSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSDKWLN 120

Query: 121 LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP 180
           LPKE+L VTVY TDDEA+DIW K+VG+PA+R++RIGD KG   + SDNFW MGDTGPCGP
Sbjct: 121 LPKEKLWVTVYATDDEAYDIWTKEVGVPAERMVRIGDNKGAP-YASDNFWTMGDTGPCGP 179

Query: 181 CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI 240
           CTEIFYDHG  IWGGPPGSPEEDGDR+IEIWNNVFMQFNR ADG + PLP PSVDTGMG+
Sbjct: 180 CTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGL 239

Query: 241 ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP 300
           ERISA++Q VHSNYEID+FQ+L+ A+A AIG  +    SL+VVADHIRSC FLI DGV+P
Sbjct: 240 ERISAVLQHVHSNYEIDLFQSLLSASAQAIGCTNDNQASLKVVADHIRSCGFLIADGVLP 299

Query: 301 SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR 360
           SNEGRGYVLRRIIRRA RHGNKLGA+G+FF+++V  LA  MG A  ELK QQA +E+VL+
Sbjct: 300 SNEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALAAEMGDAFPELKSQQAHIERVLK 359

Query: 361 IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
            EEE F +TL++G+ IL   L +L G V+ G+ VFKLYDTYGFP DLT D+ARER  ++D
Sbjct: 360 AEEEQFAKTLEQGLKILEQDLAELKGNVVPGDVVFKLYDTYGFPMDLTGDIARERNLTLD 419

Query: 421 EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS 480
           E GFE+ ME QR RAR A  FG DYNSL+K    TEF GY  + G + +  ++ +G  V 
Sbjct: 420 EEGFEREMEAQRVRARSASSFGMDYNSLVKVDVATEFTGYAGTTGSAKIVAIYKDGQSVD 479

Query: 481 TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV 540
            LS G + +IVLD TPFYAESGGQ GD+G L+  +  F V DT K G A  HHGV+A G 
Sbjct: 480 ILSEGQEGVIVLDKTPFYAESGGQIGDSGYLQAGSSRFDVRDTTKTGGAFLHHGVLASGS 539

Query: 541 LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL 600
           L     V A VD   R A SLNHSATHLLHAALR+VLGEHV QKGSLV ++ LRFDFSH 
Sbjct: 540 LMIAAPVAAHVDADVRHATSLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHF 599

Query: 601 EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMGDF 660
           EA+   ++K +E +VN E+R+N  +ET   +I+ AK KGAMALFGEKY D VRVLSMGDF
Sbjct: 600 EAIKPEQLKALEEIVNAEIRKNSPVETEETDIETAKRKGAMALFGEKYGDSVRVLSMGDF 659

Query: 661 STELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDA----- 715
           S ELCGGIHA+ TGDIGL KIISEGG+A+G+RRIEAVTG  AL YL+A + Q        
Sbjct: 660 SVELCGGIHANRTGDIGLMKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAATLI 719

Query: 716 ---------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGA 766
                    K+S +  + +LLEK+++QL+ K A+     L  Q   + GV VL  +L+G 
Sbjct: 720 KGSRDNLIDKLSAVLERNRLLEKQLEQLQAKAASAAGDDLSAQAVDVKGVKVLAVRLDGQ 779

Query: 767 DNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGG 826
           D KAL  +VD LKN+L   +I+LG+V E KV L+AGVT DLT ++KAG+L+   A  VGG
Sbjct: 780 DGKALLALVDQLKNKLGRAVILLGSVHEEKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGG 839

Query: 827 KGGGRPDMAQAGGTDAHALPSALESVDAWIAE 858
           KGGGRPDMAQ GGTD  AL +AL    A++ +
Sbjct: 840 KGGGRPDMAQGGGTDVGALDAALAQTVAFVEQ 871