Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., alanine--tRNA ligase from Pseudomonas stutzeri RCH2

 Score = 1089 bits (2816), Expect = 0.0
 Identities = 545/864 (63%), Positives = 651/864 (75%), Gaps = 18/864 (2%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           M + E+R AFL FFE KGH  V SSSL+PANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA
Sbjct: 1   MKSAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 60

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDV--LQ 120
           TT+Q+CVRAGGKHNDLENVG+TARHHTFFEMLGNFSFGDYFK DAI YAWEFLT    L 
Sbjct: 61  TTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDKWLN 120

Query: 121 LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP 180
           LPKE+L VTVY TDDEA+DIW K+VG+PA+R++RIGD KG   + SDNFW MGDTGPCGP
Sbjct: 121 LPKEKLWVTVYATDDEAYDIWTKEVGVPAERMVRIGDNKGAP-YASDNFWAMGDTGPCGP 179

Query: 181 CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI 240
           CTEIF+DHG+HIWGGPPGSPEEDGDR+IEIWNNVFMQFNR ADG + PLP PSVDTGMG+
Sbjct: 180 CTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGL 239

Query: 241 ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP 300
           ERISA++Q V+SNYEID+FQ+L+ AAADAIG  +    SL+VVADHIRSC FLI DGV P
Sbjct: 240 ERISAVLQHVNSNYEIDLFQSLLNAAADAIGCANEGQASLKVVADHIRSCGFLISDGVTP 299

Query: 301 SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR 360
           SNEGRGYVLRRI+RRA RHGNKLGA+G+FFH++V  L   MG A   LK+QQA +E+VL+
Sbjct: 300 SNEGRGYVLRRIVRRACRHGNKLGAKGSFFHRIVAALVAEMGEAFPGLKQQQAHIERVLK 359

Query: 361 IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
            EEE F +TL++G+ IL   L  L+G V+ G+ VFKLYDTYGFP DLT D+ARER  ++D
Sbjct: 360 NEEEQFAKTLEQGLKILEQDLAGLAGSVIPGDVVFKLYDTYGFPVDLTGDIARERNLTLD 419

Query: 421 EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS 480
           E GFE+ M+ QR+RAR A  FG DYNSL+K    T F GY  + G   V  +F EG  V 
Sbjct: 420 EEGFEREMQAQRERARSASAFGMDYNSLVKVEGETRFIGYQGTSGTGKVLALFKEGMVVD 479

Query: 481 TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV 540
           +LSAG++ ++VLD TPFYAESGGQ GD G L+     F V DT K G+A  HHG++  G 
Sbjct: 480 SLSAGEEGVVVLDQTPFYAESGGQIGDCGYLEAQGLRFDVRDTSKAGSAFLHHGIVDSGT 539

Query: 541 LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL 600
           L  G  V A VD   R A +LNHSATHLLHAALR++LGEHV+QKGSLV ++ LRFDFSH 
Sbjct: 540 LRVGTGVQATVDATVRQATALNHSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHF 599

Query: 601 EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM-GD 659
           EA+   +++ +E  VN E+RRN ++E    +ID AKAKGAMALFGEKY D VRVL+M G 
Sbjct: 600 EAIKPEQLRALEDRVNAEIRRNSAVEIEETDIDTAKAKGAMALFGEKYGDSVRVLTMGGG 659

Query: 660 FSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDA---- 715
           FS ELCGG H + TGDIGLFKI SEGG+AAG+RRIEAVTG  AL YL+A + Q       
Sbjct: 660 FSVELCGGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNAAEEQLKEAANL 719

Query: 716 ----------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNG 765
                     K+  +  + + LEKE++QLK K A+     L     ++ GV VL A+ +G
Sbjct: 720 LKGSRDNLLDKLGGILERNRQLEKELEQLKAKAASAAGNDLAGSAVEVKGVRVLAARQDG 779

Query: 766 ADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVG 825
            D KAL  +VD LKN+L S +I+LG V + KV L+AGVT DLT+++KAG+L+   A  VG
Sbjct: 780 LDGKALLALVDQLKNKLGSAVILLGGVQDDKVVLVAGVTQDLTSRLKAGDLMKQAAAAVG 839

Query: 826 GKGGGRPDMAQAGGTDAHALPSAL 849
           GKGGGRPDMAQ GG++   L  AL
Sbjct: 840 GKGGGRPDMAQGGGSEPARLDDAL 863