Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  987 bits (2552), Expect = 0.0
 Identities = 513/877 (58%), Positives = 618/877 (70%), Gaps = 23/877 (2%)

Query: 4   STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
           ST ++R  FL+FFE KGH IV S+ LVP NDPTLLFTN+GM QFKD FLG EKR+Y RA 
Sbjct: 8   STSQIRSDFLAFFEGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 67

Query: 64  TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
             QRC+RAGGKHNDL++VG+TARHHTFFEMLGN+SFGDYFK+DAI +AWE LT V +LP 
Sbjct: 68  DVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPA 127

Query: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
           +RLLVTVY TD+EAF++W   +GIP  RI+RIGD KG   + SDNFWQM DTGPCGPCTE
Sbjct: 128 DRLLVTVYHTDEEAFELWRDMIGIPESRIVRIGDNKGAP-YASDNFWQMADTGPCGPCTE 186

Query: 184 IFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
           IF+DHGDHI GGPPGSP+EDGDRFIEIWN VFMQF+R  DGT+ PLP P VDTGMG+ER+
Sbjct: 187 IFFDHGDHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTGMGLERL 246

Query: 244 SAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMPSNE 303
           +AI+Q VH+NYEIDVFQ LI  A+   G  DL N+SLRV+ADHIR+C+FLIVDGV+PSNE
Sbjct: 247 AAILQHVHTNYEIDVFQALIGKASALTGIADLENKSLRVIADHIRACSFLIVDGVLPSNE 306

Query: 304 GRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIEE 363
           GRGYVLRRIIRRA+RHG  LG +  FF K+V  L E+MG A  EL   Q  V + L  EE
Sbjct: 307 GRGYVLRRIIRRALRHGWMLGVRQLFFSKMVPTLVELMGEAYPELVVAQETVARALLAEE 366

Query: 364 ENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEAG 423
           E F  TLD GM I +D   + S +++ G   F+LYDTYGFP DLT D+ARERG  +D  G
Sbjct: 367 ERFAETLDAGMKIFDDVASR-SQEIIPGADAFRLYDTYGFPVDLTADIARERGMRVDMEG 425

Query: 424 FEQAMEEQRQRAREAGQFGTDY---NSLIKSATNTEFCGYTASRGQSV-VREMFVEGAEV 479
           FE AME QR+ AR AG+FG        L+ +   T F GY A    ++ V  +  +G  V
Sbjct: 426 FEFAMERQRETARAAGKFGGGVALPADLVATMAPTVFLGYEAQDADALKVVALLKQGRPV 485

Query: 480 STLSAGDKAIIVLDNTPFYAESGGQCGDTGVLK-TDAGIFHVEDTQKL-GNAIAHHGVIA 537
               AGD+ I+  D TPFYAESGGQ GD+G L  TD  I  V DTQK  G    H G IA
Sbjct: 486 DRAEAGDEVIVFTDRTPFYAESGGQVGDSGQLSGTDVSI-EVADTQKFAGQFHGHVGRIA 544

Query: 538 QGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDF 597
           +G L  GD +   +D +RR    LNHSATHLLHAALR+VLG HV QKGSLV  + LRFDF
Sbjct: 545 EGALKLGDVLSGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDF 604

Query: 598 SHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM 657
           SH + +TA E+  +ER VN EVR NHS+E + M + EA   GAMALFGEKY ++VRVL M
Sbjct: 605 SHFQPITAEELAVIERKVNAEVRTNHSVEVHNMAMQEALDFGAMALFGEKYGERVRVLKM 664

Query: 658 GDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDY------------ 705
           G +STELCGG H S TGDIGLFKI SEGG+++G+RRIEAVTG+GALDY            
Sbjct: 665 GGYSTELCGGTHVSRTGDIGLFKITSEGGVSSGVRRIEAVTGQGALDYVAEEERRLGEAA 724

Query: 706 --LDAQQAQHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQL 763
             L     +   KV  +  + K LE+E++ LK KLA+  +A L      +AGV V+  +L
Sbjct: 725 NLLGGNSTEIVDKVRALTDRQKRLERELESLKAKLASGATADLGASAVDVAGVKVIAVRL 784

Query: 764 NGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQ 823
            G D KALR  +D LK QL   +I+L   A GKV L+AGV    T KVKAGEL+  +A Q
Sbjct: 785 EGFDAKALREAMDRLKQQLGDSVIVLAGAAGGKVALVAGVNGGPTGKVKAGELLGHIASQ 844

Query: 824 VGGKGGGRPDMAQAGGTDAHALPSALESVDAWIAERL 860
           +GGKGGGRPD+AQ GG D  AL +AL+ V +W+ + L
Sbjct: 845 IGGKGGGRPDLAQGGGEDGPALATALQGVPSWVKQHL 881