Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., alanyl-tRNA synthetase from Pseudomonas syringae pv. syringae B728a

 Score = 1080 bits (2793), Expect = 0.0
 Identities = 539/864 (62%), Positives = 656/864 (75%), Gaps = 18/864 (2%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           M + E+R AFL FFE +GH  V SSSL+P NDPTLLFTNAGMNQFKDCFLG EKRAYTRA
Sbjct: 26  MKSAEIREAFLGFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA 85

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDV--LQ 120
            T+Q+CVRAGGKHNDLENVG+TARHHTFFEMLGNFSFGDYFK DAI YAW FLT    L 
Sbjct: 86  VTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEKWLN 145

Query: 121 LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP 180
           LPKE+L VTVY TDDEA+DIW K++G+PA+R++RIGD KG   + SDNFW MGDTGPCGP
Sbjct: 146 LPKEKLWVTVYATDDEAYDIWTKEIGVPAERMVRIGDNKGAP-YASDNFWTMGDTGPCGP 204

Query: 181 CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI 240
           C+EIF+DHG  IWGGPPGSPEEDGDR+IEIWNNVFMQFNR ADG + PLP PSVDTGMG+
Sbjct: 205 CSEIFFDHGPEIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGL 264

Query: 241 ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP 300
           ER+SA++Q VHSNYEID+FQ+L+ A+A AIG  +    SL+VVADHIRSC FLI DGV+P
Sbjct: 265 ERVSAVLQHVHSNYEIDLFQSLLAASAKAIGCSNDNQASLKVVADHIRSCGFLIADGVLP 324

Query: 301 SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR 360
           SNEGRGYVLRRIIRRA RHGNKLGA+G+FF+++V  L   MG+A  EL +QQ+ +E+VL+
Sbjct: 325 SNEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALVAEMGSAFPELVQQQSHIERVLK 384

Query: 361 IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
            EEE F +TL++G+ IL   L  L G V+ GE VFKLYDTYGFP DLT D+ARER  ++D
Sbjct: 385 GEEEQFAKTLEQGLKILEQDLADLKGTVVPGEVVFKLYDTYGFPMDLTGDIARERNLTLD 444

Query: 421 EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS 480
           EAGFE+ M+ QR RAR A  FG DYNSL+K    T+F GY+A+ G + V  ++ EG  VS
Sbjct: 445 EAGFEREMDAQRVRARSASSFGMDYNSLVKVDVATQFTGYSATTGSASVVALYKEGQSVS 504

Query: 481 TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV 540
            L+ G++ +++LD TPFYAESGGQ GD+G L+     F V DT K G A  HHGV+A G 
Sbjct: 505 HLNEGEEGVVILDITPFYAESGGQIGDSGFLQAGDARFDVSDTTKTGGAFLHHGVVASGS 564

Query: 541 LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL 600
           L+ G QV+  V ++ R A  LNHSATHLLHAALR+VLGEHV QKGSLV ++ LRFDFSH 
Sbjct: 565 LSVGAQVETQVADEVRDATKLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHF 624

Query: 601 EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM-GD 659
           EA+ A +++ +E +VN E+R+N  + T   +ID AK KGAMALFGEKY D VRVLSM G+
Sbjct: 625 EAIKAEQLRALEDIVNAEIRKNTEVMTEETDIDTAKKKGAMALFGEKYGDSVRVLSMGGE 684

Query: 660 FSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDA---- 715
           FS ELCGGIHAS TGDI LFKI+SEGG+AAG+RRIEAVTG  AL +L++ + Q       
Sbjct: 685 FSVELCGGIHASRTGDIALFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEAATL 744

Query: 716 ----------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNG 765
                     K++ +  + +LLEK+++QL+ K A+     L +    + GV VL  +L+G
Sbjct: 745 VKGNRDNLLDKLTAVIERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLDG 804

Query: 766 ADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVG 825
            D KAL  +VD LKN+L   +I+LG+V E KV L+AGVT DLT ++KAG+L+   A  VG
Sbjct: 805 QDGKALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVG 864

Query: 826 GKGGGRPDMAQAGGTDAHALPSAL 849
           GKGGGRPDMAQ GG DA AL SAL
Sbjct: 865 GKGGGRPDMAQGGGVDAGALDSAL 888