Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 877 a.a., alanine--tRNA ligase from Synechocystis sp000284455 PCC 6803

 Score =  709 bits (1829), Expect = 0.0
 Identities = 387/874 (44%), Positives = 543/874 (62%), Gaps = 43/874 (4%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           +S  E+R+ FL+FF  + HQI+ S+SLVP  DPT+L T AGM  FK  FLG +   + RA
Sbjct: 8   LSGPEIRQQFLNFFADRQHQILPSASLVP-EDPTVLLTIAGMLPFKPIFLGQKSAEFPRA 66

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 122
           TT+Q+C+R     ND+ENVG TARHHTFFEMLGNFSFGDYFK  AI +AWE  T V +LP
Sbjct: 67  TTSQKCIRT----NDIENVGRTARHHTFFEMLGNFSFGDYFKSQAIAWAWELSTQVFKLP 122

Query: 123 KERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCT 182
            ERL+V+V+E DDEAF IW  ++GIPA RI R+G          DNFW  G TGPCGPC+
Sbjct: 123 AERLVVSVFEEDDEAFAIWRDEIGIPAHRIQRMGA--------DDNFWVSGPTGPCGPCS 174

Query: 183 EIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
           EI+YD    +  G      ED  RFIE +N VFMQ+NR   G + PL K ++DTGMG+ER
Sbjct: 175 EIYYDFHPEL--GDEKLDLEDDSRFIEFYNLVFMQYNRDNAGNLTPLEKKNIDTGMGLER 232

Query: 243 ISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----DLTNQSLRVVADHIRSCAFLIVDG 297
           ++ I+Q V +NYE D+   +I+ AA+  G       + T  SL+V+ DH+RS   +I DG
Sbjct: 233 MAQILQKVPNNYETDLIFPIIQTAANIAGIDYAQANEKTKVSLKVIGDHVRSVVHMIADG 292

Query: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEK 357
           +  SN GRGYVLRR+IRR VRHG  LG  G F  K+     ++       + ++Q+L+E+
Sbjct: 293 ISASNLGRGYVLRRLIRRVVRHGRLLGINGEFTTKVAATAVQLAQPVYPNVLERQSLIEQ 352

Query: 358 VLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGF 417
            L+ EE  F +TL+RG  +L D +     ++  G   F LYDT+GFP +LT ++A E+G 
Sbjct: 353 ELQREEAAFLKTLERGEKLLADLMADGVTEIA-GADAFTLYDTFGFPLELTQEIAEEQGI 411

Query: 418 SIDEAGFEQAMEEQRQRAREAGQFG--TDYNSLIKSATN---TEFCGYTASRGQSVVREM 472
           ++D  GFE+AM+EQ++R++ A +    T   SL K A +   TEF GYT  +  ++V+ +
Sbjct: 412 TVDVEGFEKAMQEQQERSKAAHETIDLTVQESLDKLANHIHPTEFLGYTDLQSSAIVKAV 471

Query: 473 FVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAH 532
            V G  V    AG    IVLD TPFY ESGGQ GD G L  D  +  +ED ++      H
Sbjct: 472 LVGGELVDQAVAGQTVQIVLDQTPFYGESGGQIGDKGFLNGDNLLIRIEDVKRESGIFIH 531

Query: 533 HGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAET 592
            G + +G +  G  + A +D   R     NH+ATHLL +AL++V+ E ++Q GSLV    
Sbjct: 532 FGRVERGTVQIGTTITATIDRACRRRAQANHTATHLLQSALKRVVDEGISQAGSLVDFNR 591

Query: 593 LRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQV 652
           LRFDF+   A+T  E++++E L+NQ +   H  E  +M I +AKAKGA+A+FGEKY  +V
Sbjct: 592 LRFDFNSPRAVTMEELQQIEDLINQWIAEAHQTEVAVMPIADAKAKGAIAMFGEKYGAEV 651

Query: 653 RVLSMGDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQA- 711
           RV+ +   S ELCGG H +NT +IGLFKI++E GIAAG+RRIEAV G   LDYL+ ++A 
Sbjct: 652 RVIDVPGVSLELCGGTHVANTAEIGLFKIVAETGIAAGVRRIEAVAGPSVLDYLNVREAV 711

Query: 712 -------------QHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNV 758
                        +   +V ++  + K  +K+++ LK +LA ++S  L+ Q + +    +
Sbjct: 712 VKELGDRLKAKPEEIPDRVHQLQQELKASQKQLEALKQELALQKSEQLLTQAQTVGEFKI 771

Query: 759 LVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNV-AEGKVGLIAGVTNDL--TNKVKAGE 815
           LVA L   D ++L+   + L+ +L    ++L ++  EGKV L+A  +  L  T ++KAG+
Sbjct: 772 LVADLGTVDGESLKTAAERLQQKLGESAVVLASIPEEGKVSLVAAFSPQLVKTKQLKAGQ 831

Query: 816 LVNMVALQVGGKGGGRPDMAQAGGTDAHALPSAL 849
            +  +A   GG GGGRP++AQAGG DA  LP AL
Sbjct: 832 FIGAIAKICGGGGGGRPNLAQAGGRDASKLPEAL 865