Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., alanyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  712 bits (1837), Expect = 0.0
 Identities = 396/875 (45%), Positives = 545/875 (62%), Gaps = 45/875 (5%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           +S D++R  FL FFE KGH+ + S+SL+P  DPT+L T AGM  FK  FLG +     RA
Sbjct: 29  LSGDQIRETFLKFFEGKGHRRLPSASLIP-EDPTVLLTIAGMLPFKPIFLGQQVAEVPRA 87

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 122
           TT+Q+C+R     ND+ENVG TARHHTFFEMLGNFSFGDYFK++AI +AWE +T+V Q+P
Sbjct: 88  TTSQKCIRT----NDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWELVTEVFQVP 143

Query: 123 KERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCT 182
            ERL V+V+E DDEAF IW  ++G+P  RI R+G K        DNFW  G TGPCGPC+
Sbjct: 144 AERLAVSVFEEDDEAFAIWRDQIGVPEARIQRLGAK--------DNFWASGPTGPCGPCS 195

Query: 183 EIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
           EI+YD    +  G  G   ED  RFIE++N VFMQ+NR A G +  L K ++DTGMG+ER
Sbjct: 196 EIYYDFHPEL--GNDGLDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLER 253

Query: 243 ISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQS------LRVVADHIRSCAFLIVD 296
           ++ ++QGV +NYE D+   +I+A A AI  +D  ++S      L+V+ DH+R+   LI D
Sbjct: 254 MAQVLQGVPNNYETDLIFPIIQAVA-AIAQRDYASESESVKVSLKVIGDHLRAVTHLIAD 312

Query: 297 GVMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVE 356
           GV  SN GRGYVLRR+IRR VRHG  +G    F  ++      +M      L++++A ++
Sbjct: 313 GVTASNLGRGYVLRRLIRRVVRHGRLIGIDRPFTAEIAETAIALMAAQYPNLREREAAIK 372

Query: 357 KVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERG 416
             L  EE+ F  TL+RG  +L + L   + Q+  GE  F LYDTYGFP +LT ++A E+G
Sbjct: 373 AELTREEQRFLETLERGEKLLAELLAAATDQIR-GEDAFVLYDTYGFPLELTQEIAEEKG 431

Query: 417 FSIDEAGFEQAMEEQRQRAREAGQ-----FGTDYNSLIKSATNTEFCGYTASRGQSVVRE 471
            ++D AGFE AM  QRQR++ A +          + L +    TEF GY  +   + V  
Sbjct: 432 LTVDLAGFEAAMAAQRQRSQAAHETIDLTVQGSLDRLAEQIHPTEFVGYGDAVATAKVTA 491

Query: 472 MFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIA 531
           +  EG  V    AGD+  IVLD+TPFYAESGGQ GD GVL  ++ I  +ED QK      
Sbjct: 492 LLREGQSVEAAEAGDRVQIVLDHTPFYAESGGQVGDRGVLTGESLIVRIEDVQKESGFFV 551

Query: 532 HHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAE 591
           H+G I +G+L  GD V A +D   R     NH+ATHLL AAL+ ++ E ++Q GSLV  +
Sbjct: 552 HYGQIERGLLQVGDSVTAQIDRACRRRAQANHTATHLLQAALKLIVDEGISQAGSLVAFD 611

Query: 592 TLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQ 651
            LRFDF+   A+T  E++++E  +NQ +   H     +M I  AKAKGA+A+FGEKY  +
Sbjct: 612 RLRFDFNCPRAVTPEELRQIEDQINQWIAEAHGTVVEVMPIATAKAKGAVAMFGEKYGAE 671

Query: 652 VRVLSMGDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQA 711
           VRV+ +   S ELCGG H +NT +IGLFKIISE G+A+G+RRIEAV G   L+YL+ + A
Sbjct: 672 VRVIDVPGVSMELCGGTHVANTAEIGLFKIISEAGVASGVRRIEAVAGPAVLEYLNVRDA 731

Query: 712 -------QHDAKVSEMAAKAKLLEKEIQ-------QLKDKLAAKESAGLINQVKQIAGVN 757
                  +  AK  E++ +   L++E++        LK +LA  +S  L++Q   +    
Sbjct: 732 VVRDLSDRFKAKPEELSDRVTALQEELKANQKQLTALKAELAIAKSDALVSQAIPVGDAQ 791

Query: 758 VLVAQLNGADNKALRGMVDDLKNQL-SSGIIMLG-NVAEGKVGLIAGVTNDLTNK-VKAG 814
           VLV  L G D  AL+   + L+ +L  +G ++LG +  EGKV L+A     +  K +KAG
Sbjct: 792 VLVETLTGVDAAALQTAAERLQQKLGDAGAVVLGSSPEEGKVTLVAAFGPAIIAKGLKAG 851

Query: 815 ELVNMVALQVGGKGGGRPDMAQAGGTDAHALPSAL 849
           + +  +A   GG GGGRP++AQAGG DA  LP A+
Sbjct: 852 QFIGGIAKICGGGGGGRPNLAQAGGRDASKLPEAI 886