Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 900 a.a., alanyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 582/874 (66%), Positives = 668/874 (76%), Gaps = 15/874 (1%)

Query: 1   MFMSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYT 60
           M+ +T  +R AFL +F  +GHQ+V+SSSLVP NDPTLLFTNAGMNQFKDCFLG+EKR+Y 
Sbjct: 28  MYQTTAALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYV 87

Query: 61  RATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQ 120
           RA TAQRCVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKEDAI++AWEFLT  L+
Sbjct: 88  RAATAQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLK 147

Query: 121 LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP 180
           LPKE+L VTVY TDDEAFDIWNK++G+PA+ IIRIGD KG   F SDNFWQMGDTGPCGP
Sbjct: 148 LPKEKLCVTVYHTDDEAFDIWNKQIGVPAENIIRIGDNKGAP-FASDNFWQMGDTGPCGP 206

Query: 181 CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI 240
           CTEIFYDHG+HIWGG PGSPEEDGDRFIEIWN VFMQ+NR +DGT++PLPKP+VDTGMGI
Sbjct: 207 CTEIFYDHGEHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGI 266

Query: 241 ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP 300
           ERISAIMQGVHSNYEID+FQ LI  AA+ IG  DL N+SLRV+ADHIRSCAFL+ DGVMP
Sbjct: 267 ERISAIMQGVHSNYEIDIFQKLIAKAAEIIGVSDLENKSLRVIADHIRSCAFLVADGVMP 326

Query: 301 SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR 360
           SNEGRGYVLRRIIRRAVRHGNKLGA   FF+KLV  L E MG A  ELK  Q +VEK L+
Sbjct: 327 SNEGRGYVLRRIIRRAVRHGNKLGATDTFFYKLVPTLIEAMGDAAKELKATQTIVEKALK 386

Query: 361 IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
            EEE F RTL+RG+ +L+ AL  L G  LDGETVFKLYDTYGFP DLT DV RER   +D
Sbjct: 387 AEEEQFARTLERGLGMLDAALADLKGDTLDGETVFKLYDTYGFPVDLTADVCRERNLKVD 446

Query: 421 EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS 480
           E GF  AM EQR RA+ AGQF  DYN+ +K  T T+FCGYT    +S V  ++ +G  V 
Sbjct: 447 EEGFNAAMAEQRSRAQAAGQFSADYNAALKIDTATDFCGYTELAAESKVVALYRDGESVD 506

Query: 481 TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV 540
              AG   ++VLDNTPFYAESGGQ GD G L  +   F+V DTQK G  I H G +A G 
Sbjct: 507 AAEAGAVLVVVLDNTPFYAESGGQVGDKGQLLAEGVEFNVADTQKFGQGIGHKGQLALGS 566

Query: 541 LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL 600
           +  GD + A+VD+K R    LNHS THLLHAALR+VLG HV QKGSLV  E LRFDFSH 
Sbjct: 567 IKVGDSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHF 626

Query: 601 EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMGDF 660
           E +   E+K VE LVN ++RRNH +    M+I+EAKAKGAMALFGEKYD +VRV++MGDF
Sbjct: 627 EGVKREELKAVEDLVNTQIRRNHELNFAEMDIEEAKAKGAMALFGEKYDSKVRVVTMGDF 686

Query: 661 STELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHD------ 714
           S ELCGG H   TGDIGLFKI SEGGIAAGIRRIEAVTG  A+ Y+  QQA+ +      
Sbjct: 687 SIELCGGTHVGRTGDIGLFKITSEGGIAAGIRRIEAVTGAAAMAYVAQQQAELEEAAALL 746

Query: 715 --------AKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGA 766
                   AK+     KA+ LEKE  QLKDKLAA  SA L    ++I GV VLV +L G 
Sbjct: 747 KGDVASVVAKLKAQLDKARQLEKENAQLKDKLAAAASADLAGDAQEINGVKVLVKRLEGV 806

Query: 767 DNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGG 826
           +  ALRG+ D+LK +L SG+++L   +  KV LIAGVT DLT KVKAGELV MVA QVGG
Sbjct: 807 EAGALRGLQDELKQKLKSGVVLLAIGSGDKVNLIAGVTQDLTGKVKAGELVAMVAAQVGG 866

Query: 827 KGGGRPDMAQAGGTDAHALPSALESVDAWIAERL 860
           KGGGRPDMAQAGG++   L  AL SV  W+ ERL
Sbjct: 867 KGGGRPDMAQAGGSEPAKLDGALASVVPWLNERL 900