Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., Alanine--tRNA ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  817 bits (2111), Expect = 0.0
 Identities = 440/888 (49%), Positives = 567/888 (63%), Gaps = 42/888 (4%)

Query: 4   STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
           +T E+RR FL FF   GHQ V SS LVP NDPTL+FTNAGM QFK+ F G E R Y RAT
Sbjct: 3   TTSEIRRTFLDFFVKNGHQEVASSPLVPLNDPTLMFTNAGMVQFKNVFTGAETRPYHRAT 62

Query: 64  TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
           T+Q+CVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKE AI +AW  +T+   LPK
Sbjct: 63  TSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIDFAWRLITEEYALPK 122

Query: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
           +RLLVTV+ +D++A  +W K  G+P +RIIRI          +DNFW MGDTGPCGPC+E
Sbjct: 123 DRLLVTVHTSDEDAAGLWRKVAGLPDERIIRIP--------TNDNFWAMGDTGPCGPCSE 174

Query: 184 IFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
           IF+DHG  + GGPPGS +E+GDRFIEIWN VFMQF +        LP+PS+DTGMG+ER+
Sbjct: 175 IFFDHGPKVAGGPPGSADENGDRFIEIWNLVFMQFEQLTVDQRVALPRPSIDTGMGLERV 234

Query: 244 SAIMQGVHSNYEIDVFQTLIKAAADAIGY--QDLTNQSLRVVADHIRSCAFLIVDGVMPS 301
           +A++QG H NY+ID+ + LI+A A A G         S RV+ADH+RS  FLI DGV+PS
Sbjct: 235 AAVLQGKHDNYDIDLMRALIEAIASAAGTDPDGPHKVSHRVIADHLRSACFLIADGVLPS 294

Query: 302 NEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRI 361
           NEGRGYVLRRI+RRA+RH + +G       KLV  L   M     EL +  AL+ + L++
Sbjct: 295 NEGRGYVLRRIMRRAMRHAHMMGCVDPLMFKLVPALNREMADQFPELNRANALITETLKL 354

Query: 362 EEENFGRTLDRGMSIL-NDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
           EE  F + LDRG+ +L  +  D  SG  L G   FKLYDTYGFP DLT D  R RG  +D
Sbjct: 355 EETRFKQMLDRGLKLLAEETGDLASGDSLPGPVAFKLYDTYGFPLDLTQDALRPRGIGVD 414

Query: 421 EAGFEQAMEEQRQRARE----AGQFGTD--YNSLIKSATNTEFCGYTASRGQSVVREMFV 474
            AGF+ AM  QR+ AR+    +G   T+  +  +      +EF GYT++  +  +  + V
Sbjct: 415 TAGFDAAMARQREDARKSWTGSGDHATEAVWFDIRDRVGASEFLGYTSTDAEGAIVALVV 474

Query: 475 EGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLK-TDAGIFHVEDT-QKLGNAIAH 532
           +G  V +  A  +  ++ + TPFY ESGGQ GD G ++  + G   V DT +KLG    H
Sbjct: 475 DGKVVESAPADTEVAVIANQTPFYGESGGQMGDAGEIRLAEGGKVVVRDTAKKLGALHVH 534

Query: 533 HGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAET 592
            G +    +  G     +VD +RR A+  +HSATHLLH ALR+ LGEHV QKGSLV  + 
Sbjct: 535 IGRVEGATIRVGQAARFVVDTERRDALRSHHSATHLLHEALRRRLGEHVTQKGSLVAPDR 594

Query: 593 LRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQV 652
           LRFD SH + ++AAEI+ VE  VN+E+R N  I T IM+ D A   GAMALFGEKY ++V
Sbjct: 595 LRFDISHPKPLSAAEIRVVEDDVNREIRANAEITTQIMDPDSAIEAGAMALFGEKYGEEV 654

Query: 653 RVLSMG--------DFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALD 704
           RV+SMG         FS ELCGG HA  TGDIG FKII EG +A+G+RRIEAVTG+ A +
Sbjct: 655 RVVSMGRREPGANRPFSVELCGGTHARRTGDIGFFKIIGEGAVASGVRRIEAVTGQAAFE 714

Query: 705 YLDAQQ--------------AQHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQV 750
           +++AQ               A    ++  +    + LE+++   + KLA          V
Sbjct: 715 HIEAQDDLVSGAAQLLKVTPADLPGRIQALLDDRRRLERDLADARRKLATGGGGAAAPAV 774

Query: 751 KQIAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNK 810
            +I GV  +   L     K L+GMVD++K QL SG++ L  VA+GK  L+ GVT DL  +
Sbjct: 775 VEINGVKWVGRLLEDVPAKDLKGMVDEVKKQLGSGVVALIAVADGKASLVVGVTEDLVGR 834

Query: 811 VKAGELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVDAWIA 857
             A  LV   A  +GGK GGGRPDMAQAGG D     +AL +++A +A
Sbjct: 835 FDAVALVRAGAGAIGGKGGGGRPDMAQAGGPDGAQAGAALAAIEAALA 882