Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., alanine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  841 bits (2173), Expect = 0.0
 Identities = 452/892 (50%), Positives = 587/892 (65%), Gaps = 50/892 (5%)

Query: 6   DEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTA 65
           +E+R  FL++F   GH+IV SS LVP NDPTL+FTNAGM QFK+ F GLEKR+Y RATT+
Sbjct: 5   NEIRSTFLNYFAKNGHEIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRSYQRATTS 64

Query: 66  QRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPKER 125
           Q+CVRAGGKHNDL+NVG+TARH TFFEMLGNFSFGDYFKE AI+ AW  +T    L K++
Sbjct: 65  QKCVRAGGKHNDLDNVGYTARHLTFFEMLGNFSFGDYFKERAIELAWNLITRDFGLKKDK 124

Query: 126 LLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTEIF 185
           LLVTVY TDDEA   W K  G   DRIIRI          SDNFW MGDTGPCGPC+EIF
Sbjct: 125 LLVTVYHTDDEAAGYWKKIAGFSDDRIIRIP--------TSDNFWAMGDTGPCGPCSEIF 176

Query: 186 YDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISA 245
            D G+HI+GGPPGSP+EDGDRF+E WN VFMQ+++       PLP+PS+DTGMG+ER+++
Sbjct: 177 IDRGEHIFGGPPGSPDEDGDRFLEFWNLVFMQYDQVTKDERVPLPRPSIDTGMGLERMAS 236

Query: 246 IMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQ---SLRVVADHIRSCAFLIVDGVMPSN 302
           I+QGV S ++ D+F++LI A + A+G +  T Q   S RV+ADH+RS +FLI DGV+PSN
Sbjct: 237 ILQGVDSVFDTDLFRSLIDATSSALG-RGPTEQDAASFRVIADHLRSSSFLIADGVLPSN 295

Query: 303 EGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIE 362
           EGRGYVLRRI+RRA+RH   LGA      +LV  L   MG A  EL + +A++E+ +R+E
Sbjct: 296 EGRGYVLRRIMRRAMRHAQLLGASEPLMWRLVWALVREMGQAYPELVRAEAMIEETMRLE 355

Query: 363 EENFGRTLDRGMSILNDALDQL-SGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDE 421
           E  F +TLDRG++IL++    L  G + DGET F LYDTYGFP DLT D  R RG ++D 
Sbjct: 356 ETRFRKTLDRGLAILDEKSAGLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGINVDI 415

Query: 422 AGFEQAMEEQRQRARE----AGQFGTD--YNSLIKSATNTEFCGYTASRGQSVVREMFVE 475
           A F  AM+ QR +AR     +G+  T+  + SL +    TEF GY     + VV  +  +
Sbjct: 416 ASFTDAMDRQRAKARASWAGSGEAATEAVWFSLREKLGATEFLGYDTETAEGVVTALVKD 475

Query: 476 GAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDT-QKLGNAIAHHG 534
           GAEV  L AG+   I+++ TPFYAESGGQ GDTGVL  D   F V DT +K G+   H G
Sbjct: 476 GAEVDALKAGESGAIIVNQTPFYAESGGQVGDTGVLTADGVRFVVTDTMKKAGDLFVHFG 535

Query: 535 VIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLR 594
            + QG +  GD +   VD  RR+AI  NHSATHLLH ALR+VLG+H+AQKGSLV  + LR
Sbjct: 536 TVEQGSIKLGDALALDVDHARRSAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLR 595

Query: 595 FDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRV 654
           FDF H + +T  E+++VE + N  V  N  + T +M +D+A+  GA ALFGEKY D+VRV
Sbjct: 596 FDFVHQKPITQDELRKVEDIANDIVLENDEVVTRLMAVDDAREAGARALFGEKYGDEVRV 655

Query: 655 LSMG-----------DFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGAL 703
           +SMG            +S ELCGG H   TGDIGL  I  E  +AAG+RRIEA+TG  A 
Sbjct: 656 VSMGKAARDHGSNVFGWSVELCGGTHVKRTGDIGLVSITGESAVAAGVRRIEALTGRAAR 715

Query: 704 DYLDAQQA--------------QHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESA---GL 746
              +A  +                 A+++ +  + K LE+E+ + + KLA   SA   G 
Sbjct: 716 HNANAAISTAKLAASELRTTLDDMPARITALMDERKKLERELSEARKKLAMGGSAAGDGA 775

Query: 747 INQVKQIAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAE-GKVGLIAGVTN 805
            + V+ I G+ ++   + G + K L+G+VD  K QL SG+I L   +E GK  ++ GVT 
Sbjct: 776 ASDVRDIGGIKLMARAVEGIEIKDLKGLVDQGKKQLGSGVIALVATSEDGKGSIVVGVTP 835

Query: 806 DLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVDAWI 856
           DL ++  A +LV   +  +GGK GGG+PDMAQAGG D     +ALE++ A I
Sbjct: 836 DLVSRFSAVDLVRKASEVLGGKGGGGKPDMAQAGGPDGSKAGAALEAIAAAI 887