Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., alanyl-tRNA synthetase AlaS from Phaeobacter inhibens DSM 17395

 Score =  868 bits (2242), Expect = 0.0
 Identities = 450/887 (50%), Positives = 589/887 (66%), Gaps = 44/887 (4%)

Query: 6   DEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTA 65
           +++R  FL++F  +GH+IV SS LVP NDPTL+F N+GM QFK+CF G+E R Y RATT+
Sbjct: 5   NDIRSTFLNYFAKQGHEIVSSSPLVPRNDPTLMFANSGMVQFKNCFTGVETRDYKRATTS 64

Query: 66  QRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPKER 125
           Q+CVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKE+AI +AW+ +T    + K R
Sbjct: 65  QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWDLITKEFGIDKSR 124

Query: 126 LLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTEIF 185
           LL TVY TDDEAF+IW KKVG+P DRIIRI          SDNFWQMG TGPCGPCTEIF
Sbjct: 125 LLTTVYHTDDEAFEIW-KKVGVPEDRIIRID--------TSDNFWQMGPTGPCGPCTEIF 175

Query: 186 YDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISA 245
           YDHGDHIWGGPPGS +EDGDRFIEIWN VFMQ  +  DGTM+ L   S+DTGMG+ERI A
Sbjct: 176 YDHGDHIWGGPPGSADEDGDRFIEIWNVVFMQNEQFEDGTMKALDMQSIDTGMGLERIGA 235

Query: 246 IMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSL--RVVADHIRSCAFLIVDGVMPSNE 303
           ++QG H NY+ D+F+ LI+A+AD        +Q++  RV+ADH+RS +FL+ DGVMPSN+
Sbjct: 236 LLQGSHDNYDTDLFKALIEASADVTNVDPYGDQNVHHRVIADHLRSTSFLMADGVMPSND 295

Query: 304 GRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIEE 363
           GRGYVLRRI+RRA+RH + LGA+    H+LV  L + MG A  EL + Q ++E+ L  EE
Sbjct: 296 GRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVPALVQQMGAAYPELGRAQPMIEETLHQEE 355

Query: 364 ENFGRTLDRGMSILNDALDQL-SGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEA 422
             F +TLDRG+ +L+D L  L  G  L G   FKLYDT+GFP DLT D  RE+G ++D  
Sbjct: 356 TRFKQTLDRGLKLLDDELSGLDEGAPLPGAAAFKLYDTFGFPLDLTQDALREKGRTVDTD 415

Query: 423 GFEQAMEEQRQRAREA------GQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEG 476
           GF+ AM EQ+ +AR A          T +  +   A  T+F GY     +  +  + V+G
Sbjct: 416 GFDSAMAEQKAKARAAWSGSGESADSTIWFDVADQAGTTDFLGYETEAAEGQIMALVVDG 475

Query: 477 AEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVI 536
           A+V+    G    +VL+ TPFYAESGGQ GD+G ++ D G+  V DT+K      H G +
Sbjct: 476 AQVAEAGVGTDVQVVLNQTPFYAESGGQVGDSGEIRVDGGVVRVTDTKKAAGVFIHFGKV 535

Query: 537 AQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFD 596
             G++  G      VD  RR+AI  NHSATHLLH ALR+ LG+HVAQ+GSL   + LRFD
Sbjct: 536 ESGMITKGAAAQLEVDHLRRSAIRANHSATHLLHEALREALGDHVAQRGSLNADDRLRFD 595

Query: 597 FSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLS 656
           FSH +A++  E++ V   VN+ +R+N  +ET IM  D+A+A GA ALFGEKY D+VRV+S
Sbjct: 596 FSHNKALSGEELRRVAVDVNRFIRQNTVVETRIMTPDDARALGAQALFGEKYGDEVRVVS 655

Query: 657 MGD-----------FSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDY 705
           MG+           +S ELCGG H   TGDIG F I+S+   +AG+RRIEA+TG  A  +
Sbjct: 656 MGEAATGKGQDGNTYSIELCGGTHVRQTGDIGTFVILSDSASSAGVRRIEALTGAEAFAH 715

Query: 706 LDAQ-----------QAQHDAKVSEMAA---KAKLLEKEIQQLKDKLAAKESAGLINQVK 751
           LD +           +AQ +  +  + A   + K L+ E+ QLK ++A    AG  ++ K
Sbjct: 716 LDREALRMAEVANSLKAQPEEVMDRLKALMDERKALQNEVSQLKQQVAMGGGAGGASETK 775

Query: 752 QIAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKV 811
           ++ G   L   L G   K LRG++D  K ++ SG+I+L     GKV + AGVT+DLT +V
Sbjct: 776 EVGGKTFLGQALEGVSGKDLRGLIDAHKQKIGSGVILLIANDGGKVAVAAGVTDDLTAEV 835

Query: 812 KAGELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVDAWIA 857
            A +++      VGGK GGGRPDMAQ GG D      A+++ +A +A
Sbjct: 836 SAVDVLKAAVPAVGGKGGGGRPDMAQGGGKDFAGAEEAIKAAEALLA 882