Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 904 a.a., Probable alanyl-tRNA synthetase AlaS (alanine--tRNA ligase) (alanine translase) (ALARS) from Mycobacterium tuberculosis H37Rv

 Score =  566 bits (1458), Expect = e-165
 Identities = 345/915 (37%), Positives = 498/915 (54%), Gaps = 77/915 (8%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           + T E+R+ FL  F   GH  V S+S++  +DP LLF NAGM QF   FLG     Y  A
Sbjct: 1   VQTHEIRKRFLDHFVKAGHTEVPSASVI-LDDPNLLFVNAGMVQFVPFFLGQRTPPYPTA 59

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQ-- 120
           T+ Q+C+R      D++ VG T RH+TFF+M GNFSFGDYFK  AI+ AW  LT+ L   
Sbjct: 60  TSIQKCIRTP----DIDEVGITTRHNTFFQMAGNFSFGDYFKRGAIELAWALLTNSLAAG 115

Query: 121 ---LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGP 177
              L  ER+  TVY  DDEA  +W +  G+PA+RI R G         +DN+W MG  GP
Sbjct: 116 GYGLDPERIWTTVYFDDDEAVRLWQEVAGLPAERIQRRGM--------ADNYWSMGIPGP 167

Query: 178 CGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTME-------PLP 230
           CGP +EI+YD G     GP G P    DR++E+WN VFMQ N   +GT +       PLP
Sbjct: 168 CGPSSEIYYDRGPEF--GPAGGPIVSEDRYLEVWNLVFMQ-NERGEGTTKEDYQILGPLP 224

Query: 231 KPSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAD-AIGYQDLTNQS----LRVVAD 285
           + ++DTGMG+ERI+ ++Q VH+ YE D+ + +I   A  A    D+ N       R++AD
Sbjct: 225 RKNIDTGMGVERIALVLQDVHNVYETDLLRPVIDTVARVAARAYDVGNHEDDVRYRIIAD 284

Query: 286 HIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAG 345
           H R+ A LI DGV P N+GRGYVLRR++RR +R    LG   A    L+  +   MG + 
Sbjct: 285 HSRTAAILIGDGVSPGNDGRGYVLRRLLRRVIRSAKLLGIDAAIVGDLMATVRNAMGPSY 344

Query: 346 VELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLS---GQVLDGETVFKLYDTYG 402
            EL      + ++   EE  F RTL  G  +  +           VL G   F L+DTYG
Sbjct: 345 PELVADFERISRIAVAEETAFNRTLASGSRLFEEVASSTKKSGATVLSGSDAFTLHDTYG 404

Query: 403 FPADLTNDVARERGFSIDEAGFEQAMEEQRQRAR-------EAGQFGTDYNSLIKSATNT 455
           FP +LT ++A E G  +DE GF + M EQR+RA+        A    + Y  L+ +   T
Sbjct: 405 FPIELTLEMAAETGLQVDEIGFRELMAEQRRRAKADAAARKHAHADLSAYRELVDAGA-T 463

Query: 456 EFCGYTASRGQSVVREMFVEGAEVSTLS--------AGDKAIIVLDNTPFYAESGGQCGD 507
           EF G+   R Q+ +  +FV+G  V  ++         G +  +VLD TP YAESGGQ  D
Sbjct: 464 EFTGFDELRSQARILGIFVDGKRVPVVAHGVAGGAGEGQRVELVLDRTPLYAESGGQIAD 523

Query: 508 TGVLK----TDAGIFHVEDTQKLGNAIAHHGV-IAQGVLATGDQVDAIVDEKRRAAISLN 562
            G +     ++A    V D QK+   +  H V +  G    GD V A VD   R   +  
Sbjct: 524 EGTISGTGSSEAARAAVTDVQKIAKTLWVHRVNVESGEFVEGDTVIAAVDPGWRRGATQG 583

Query: 563 HSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRN 622
           HS TH++HAALR+VLG +  Q GSL R   LRFDF+    +T  +  +VE + N+ V+ +
Sbjct: 584 HSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFNWQGPLTDDQRTQVEEVTNEAVQAD 643

Query: 623 HSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM-GDFSTELCGGIHASNTGDIGLFKI 681
             + T    +D+AKA GA+ALFGE Y D+VRV+ M G FS ELCGG H SNT  IG   I
Sbjct: 644 FEVRTFTEQLDKAKAMGAIALFGESYPDEVRVVEMGGPFSLELCGGTHVSNTAQIGPVTI 703

Query: 682 ISEGGIAAGIRRIEAVTGEGALDYLDAQQA--------------QHDAKVSEMAAKAKLL 727
           + E  I +G+RR+EA  G  +  +L  ++A              +  A+V+ +  + +  
Sbjct: 704 LGESSIGSGVRRVEAYVGLDSFRHLAKERALMAGLASSLKVPSEEVPARVANLVERLRAA 763

Query: 728 EKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGADNKA-LRGMVDDLKNQLSSGI 786
           EKE+++++   A   +       ++I  V ++  +++G    A LR ++ D++ +L S  
Sbjct: 764 EKELERVRMASARAAATNAAAGAQRIGNVRLVAQRMSGGMTAADLRSLIGDIRGKLGSEP 823

Query: 787 IMLGNVAEGKVGLI--AGVTNDLTNK--VKAGELVNMVALQVGGKGGGRPDMAQAGGTDA 842
            ++  +AEG+   +  A   N       ++A +LV  +A+ V G+GGG+ D+AQ  G + 
Sbjct: 824 AVVALIAEGESQTVPYAVAANPAAQDLGIRANDLVKQLAVAVEGRGGGKADLAQGSGKNP 883

Query: 843 HALPSALESVDAWIA 857
             + +AL++V + IA
Sbjct: 884 TGIDAALDAVRSEIA 898