Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., alanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  815 bits (2105), Expect = 0.0
 Identities = 430/884 (48%), Positives = 592/884 (66%), Gaps = 38/884 (4%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           ++ +E+RR FL F+++ GH+ V SSSLVP +DP+LLFTNAGM QFK  FLG EKRAY+RA
Sbjct: 2   ITANEIRRRFLEFYKAHGHEAVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSRA 61

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 122
           TT+Q+C+R GGKHNDLENVG TARHHTFFEMLGNFSFGDYFKEDAI++AW+FLT+ L+LP
Sbjct: 62  TTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEELKLP 121

Query: 123 KERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCT 182
           KERL  TV+  DDEA  +W K   IPA+RI R+G+K        DNFW MGDTGPCGPC+
Sbjct: 122 KERLYATVFRDDDEAEQLWLKHSDIPAERIYRMGEK--------DNFWSMGDTGPCGPCS 173

Query: 183 EIFYDHGDHIWGGPP-GSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIE 241
           EI  D G+H+  GP  G  + D DRF+EIWN VFMQ+++ A G  EPLPKPS+DTGMG+E
Sbjct: 174 EILIDQGEHMTCGPDCGIGKCDCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLE 233

Query: 242 RISAIMQGVHSNYEIDVFQTLIKAAADA--IGYQ--DLTNQSLRVVADHIRSCAFLIVDG 297
           RI+A+ QGV SN++ D+FQ +I+       + Y+  D T+ +LRV+ADH R+ AF+I DG
Sbjct: 234 RITAVCQGVFSNFDTDIFQAIIQYTCGLANVSYRSDDETDTALRVIADHSRAIAFMITDG 293

Query: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEK 357
           ++PSNEGRGYVLRR+IRRA R G  +G    F HK    + ++MG    EL++    + +
Sbjct: 294 ILPSNEGRGYVLRRLIRRAYRFGRLIGLTDTFLHKTALKVVDIMGDDYPELRENSDFMAR 353

Query: 358 VLRIEEENFGRTLDRGMSILNDALDQLSGQ---VLDGETVFKLYDTYGFPADLTNDVARE 414
           V+R EE+ F RTLD+G+S+L D L  LS      + G+  F+LYDT+GFP D+ ND+A +
Sbjct: 354 VVREEEDRFNRTLDKGLSMLEDELATLSASGAAHVPGDIAFRLYDTFGFPLDIVNDIAEK 413

Query: 415 RGFSIDEAGFEQAMEEQRQRAREAGQ------FGTDYNSLIKSATNTEFCGYTASRGQS- 467
           RGFS+DE GF+  M+EQ++RA+ A +        + +  L++    +EF GY    G+  
Sbjct: 414 RGFSVDEDGFKALMKEQKERAKAAWKGSGEKDIASRFQPLLEEGMRSEFIGYDHLCGEGR 473

Query: 468 VVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLG 527
           +V  M      V  L+AG K  +V + TPFY  SGGQ GD G + + +G   V DT K  
Sbjct: 474 IVALMDEHALAVERLAAGQKGYLVTNRTPFYGASGGQSGDIGTIASPSGKVRVVDTIKPS 533

Query: 528 -NAIAHHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGS 586
              + HH    +G +    +VD  V E  R A + NH+ THLLHAALR+VLG+HV Q GS
Sbjct: 534 PELVVHHVEAVEGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGS 593

Query: 587 LVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGE 646
           LV  + LRFDF+H+  MT  E+  VER VN+ +  +  +ET+ M+ D+A  +GAMALFGE
Sbjct: 594 LVAPDRLRFDFTHIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGE 653

Query: 647 KYDDQVRVLSMGDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYL 706
           KY D+VRV+++ D S ELCGG H   TG  GLF I+SE G+AAG+RRIEA+TG  A+  +
Sbjct: 654 KYGDEVRVVAIADESVELCGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAV 713

Query: 707 DAQQAQH-------DAKVSEMAAKAKLLEKEIQQLK---DKLAAKESAG----LINQVKQ 752
            AQ+++         A+  E+ ++ + L+KE + L+   ++ AA+ ++G    ++++   
Sbjct: 714 LAQRSEQAQLSAMLKARPGEIVSRVESLQKENRTLRKDMERAAAQATSGQGRNIMDEATD 773

Query: 753 IAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVK 812
           +AGV +L A++   + KALR ++DD++++L SGI  L  V   KV LI  V+ DL  +  
Sbjct: 774 VAGVKLLAAKVEVPNVKALRDLMDDVRSKLVSGIACLAAVDGDKVQLIIAVSKDLQTRFT 833

Query: 813 AGELVNMVALQVGGKGGGRPDMAQAGGTDAHALPSALESVDAWI 856
           A +L+  VA +VGG GGGRPDMAQAGGT+   + +A   + + I
Sbjct: 834 APQLIKDVAAEVGGSGGGRPDMAQAGGTNPAGIDAAFAKLRSLI 877