Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., alanyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 590/874 (67%), Positives = 673/874 (77%), Gaps = 15/874 (1%)

Query: 1   MFMSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYT 60
           M+ +T  +R AFL FF S GHQ+V+SSSLVP NDPTLLFTNAGMNQFKD FLG++KR+YT
Sbjct: 1   MYQTTAALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYT 60

Query: 61  RATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQ 120
           RATTAQRCVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKEDAI++ W FLT+VL+
Sbjct: 61  RATTAQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLK 120

Query: 121 LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP 180
           LPKERL VTVY+TDDEAF+IWNKK+G+ A+ IIRIGD KG   + SDNFWQMGDTGPCGP
Sbjct: 121 LPKERLCVTVYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAP-YASDNFWQMGDTGPCGP 179

Query: 181 CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI 240
           CTEIFYDHGDHIWGG PGSPEEDGDRFIEIWN VFMQ+NR A G M PLPKPSVDTGMGI
Sbjct: 180 CTEIFYDHGDHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGI 239

Query: 241 ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP 300
           ERI+AIMQGVHSNYEID+F+ LI  AA+ IG  DL+N+SLRV+ADHIRSCAFL+ DGVMP
Sbjct: 240 ERIAAIMQGVHSNYEIDIFRALIAKAAEIIGVTDLSNKSLRVIADHIRSCAFLVADGVMP 299

Query: 301 SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR 360
           SNEGRGYVLRRIIRRAVRHGNKLGA  AFF+KLV  L EVMG A   L   Q +VEK L+
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPTLIEVMGDAAKGLADTQVIVEKALK 359

Query: 361 IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
            EEE F RTL+RG+ IL+ AL++L G  LDGETVFKLYDTYGFP DLT DV RER   +D
Sbjct: 360 AEEEQFARTLERGLGILDSALNELQGDTLDGETVFKLYDTYGFPVDLTADVCRERNIIVD 419

Query: 421 EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS 480
           EAGFE AM EQR RA+ AG FG DYN+ +K    T FCGY+   G + V  +++ G  VS
Sbjct: 420 EAGFEVAMAEQRSRAQAAGNFGADYNAALKIDAETAFCGYSELTGNAKVTALYLNGESVS 479

Query: 481 TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV 540
            +SAGD A++VLD TPFYAESGGQ GD GVL      F V DTQK G A  H G +  G 
Sbjct: 480 AISAGDDAVVVLDVTPFYAESGGQVGDKGVLVAQGIEFAVSDTQKFGQASGHKGTLTAGS 539

Query: 541 LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL 600
           L+ G  ++A VD+K R    LNHS THLLHAALR+VLG HV QKGSLV  E LRFDFSH 
Sbjct: 540 LSVGQVLEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHF 599

Query: 601 EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMGDF 660
           EA+  AE+K+VE LVN ++RRNH ++   M IDEAK KGAMALFGEKYD QVRV++MGDF
Sbjct: 600 EAVKPAELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKYDAQVRVVTMGDF 659

Query: 661 STELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHD------ 714
           S ELCGG H   TGDIGLFKI SEGGIAAG+RRIEAVTG  A+ Y+  QQAQ +      
Sbjct: 660 SIELCGGTHVGRTGDIGLFKITSEGGIAAGVRRIEAVTGAAAMAYVAQQQAQLEEAAALL 719

Query: 715 --------AKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGA 766
                   AK+     K K LEK++QQLKDKLAA  SA L      + GVNVL+ +L G 
Sbjct: 720 KGDTQSVVAKLKAQLDKMKQLEKDMQQLKDKLAAAASADLAGDAVVVNGVNVLIKKLEGV 779

Query: 767 DNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGG 826
           +  ALRG+ D+LK +L S +I+LG   EGKV LIAGV+NDL  KVKAGELV MVA QVGG
Sbjct: 780 EAGALRGLQDELKQKLKSAVILLGVAQEGKVNLIAGVSNDLVGKVKAGELVAMVAAQVGG 839

Query: 827 KGGGRPDMAQAGGTDAHALPSALESVDAWIAERL 860
           KGGGRPDMAQAGG+    L +AL  V  WI ERL
Sbjct: 840 KGGGRPDMAQAGGSQPENLDAALSQVLPWITERL 873