Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., RecA protein from Pseudomonas fluorescens FW300-N2E2

 Score =  509 bits (1311), Expect = e-149
 Identities = 250/344 (72%), Positives = 299/344 (86%), Gaps = 1/344 (0%)

Query: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
           MD+NK+KALAAALGQIE+QFGKG++MR+GD     + +ISTGSL LDIALG GGLP GRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRI 60

Query: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
           VEI+GPESSGKTTLTL +IA AQ+ G TCAF+DAEHALDP YA KLGVN+D+LLVSQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
           GEQALEI D L RS AVDVI+VDSVAAL PKAEIEGEMGD H+GLQAR++SQA+RK+TGN
Sbjct: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240
           +K +NC+ IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEG+EVVG+E
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300
           TR+KVVKNK+A+PF++A  QI+YG+G    GE+IDLGV H  VEKSGAWY+YNG KIGQG
Sbjct: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGTKIGQG 300

Query: 301 KANACKYLKENPEIAKTLDKKLREMLLNP-ENMQLIAETSSAAD 343
           KAN+ K+L +NPE+A  L+K+LR+ LL+P  +++ +A   +A D
Sbjct: 301 KANSAKFLADNPEVAAALEKQLRDKLLSPVADVKSVANRETADD 344