Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., recombinase A from Synechococcus elongatus PCC 7942

 Score =  405 bits (1041), Expect = e-118
 Identities = 203/338 (60%), Positives = 260/338 (76%), Gaps = 3/338 (0%)

Query: 5   KQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIF 64
           K+KAL   L QIE+ FGKG+IMRLGD   + VETISTG+L+LD+ALG GGLP GRI+E++
Sbjct: 12  KEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALG-GGLPKGRIIEVY 70

Query: 65  GPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQA 124
           GPESSGKTTLTL  IA  Q++G   AF+DAEHALDPVYA  +GV+ID LL+SQPDTGE A
Sbjct: 71  GPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSVGVDIDNLLISQPDTGEMA 130

Query: 125 LEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQS 184
           LEI D L RS AVD++V+DSVAAL P+AEIEGEMGD+ +GLQAR++SQAMRK+TGN+ +S
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKS 190

Query: 185 NCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRIK 244
            C  IF+NQ+R KIGV +G+PETTTGG ALKFYASVRLDIRR   +K+G E  G   ++K
Sbjct: 191 GCTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLKKGTEEYGTRAKVK 250

Query: 245 VVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKANA 304
           VVKNK+A PF+ A   I++G+G +  G L+DL  +  ++ + GAWYSYNGD IGQG+ N 
Sbjct: 251 VVKNKVAPPFRIAEFDILFGKGISTLGCLVDLAEETGVILRKGAWYSYNGDNIGQGRDNT 310

Query: 305 CKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAA 342
             +L+E+P+   T+++++RE L      Q+ A T  AA
Sbjct: 311 ITHLEEHPDFRATVEQQVREKL--ALGAQVSANTVGAA 346