Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., recombinase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  557 bits (1435), Expect = e-163
 Identities = 281/346 (81%), Positives = 315/346 (91%), Gaps = 6/346 (1%)

Query: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
           +D NK+KALAA LGQIEKQFGKGSIM+LG++R+MDVETISTGSLSLD+ALGAGGLPMGRI
Sbjct: 3   IDPNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62

Query: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
           VEI+GPESSGKTTLTLE+IAAAQREGK CAFIDAEHALDPVYA+KLGV+ID LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
           GEQALEICDAL RSGAVDVI+VDSVAAL PKAEIEGE+GDSH+GL ARM+SQAMRKL GN
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLAGN 182

Query: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240
           LKQSN + IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEG+EVVGNE
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242

Query: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300
           TR+KVVKNKIAAPF++A+ QI+YGQG NR GEL+DLGV HK++EKSGAWYSY GDKIGQG
Sbjct: 243 TRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQG 302

Query: 301 KANACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADDVE 346
           +ANA K+L EN EIA  ++K LREMLL+       + +S +AD+VE
Sbjct: 303 RANATKFLAENTEIAAEIEKTLREMLLSH------SSSSGSADEVE 342