Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., RecA DNA recombination protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  462 bits (1190), Expect = e-135
 Identities = 228/335 (68%), Positives = 283/335 (84%), Gaps = 7/335 (2%)

Query: 4   NKQKALAAALGQIEKQFGKGSIMRLGDNRAM-DVETISTGSLSLDIALGAGGLPMGRIVE 62
           +KQKAL AA+GQIE+ FGKGSIM+LG   ++ D+E+ISTGSL LDIALG GGLP GRIVE
Sbjct: 15  DKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVE 74

Query: 63  IFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGE 122
           I+GPESSGKTTL L ++A AQ++G  CAF+DAEHA DP+YA+KLGV++D+LLVSQPDTGE
Sbjct: 75  IYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGE 134

Query: 123 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLK 182
           QALEI D L RSGA+DV+V+DSVAAL PKAE+EG+MGDSH+GLQAR++SQA+RKLTG + 
Sbjct: 135 QALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLTGTVS 194

Query: 183 QSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETR 242
           +SN + IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR GA+K+ EEVVGN+TR
Sbjct: 195 RSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKDKEEVVGNQTR 254

Query: 243 IKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKA 302
           +KVVKNK+A PFK     IMYG+G ++ GE++DLGVK  ++EKSGAW+SYN  +IGQG+ 
Sbjct: 255 VKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGRE 314

Query: 303 NACKYLKENPEIAKTLDKKLREMLLNPENMQLIAE 337
           NA ++L++NP +A+ ++  +R       N  LIAE
Sbjct: 315 NAKQFLRDNPAMAEEIENAVR------ANAGLIAE 343