Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

 Score =  342 bits (876), Expect = 3e-98
 Identities = 167/249 (67%), Positives = 201/249 (80%)

Query: 4   NKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEI 63
           +++KAL  A+ QIEK +GKGS+MRLGD     +  I TGS++LD+ALG GGLP GR++EI
Sbjct: 6   DREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEI 65

Query: 64  FGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQ 123
           +GPESSGKTT+ L  +A AQ  G   AFIDAEHALDP YAKKLGV+ D LLVSQPDTGEQ
Sbjct: 66  YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 125

Query: 124 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
           ALEI D L RSGA+D++V+DSVAAL P+AE+EGEMGDSH+GLQAR++SQA+RK+TG L  
Sbjct: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185

Query: 184 SNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRI 243
           S    IFINQ+R KIGVMFG+PETTTGG ALKFYASVR+D+RR   +K+G   VGN TR+
Sbjct: 186 SGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRV 245

Query: 244 KVVKNKIAA 252
           KVVKNK  A
Sbjct: 246 KVVKNKCLA 254



 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 39/82 (47%), Positives = 60/82 (73%)

Query: 245 VVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKANA 304
           VV +  + PFK+A   I+YG+G +REG LID+GV   ++ KSGAW++Y G+++GQGK NA
Sbjct: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746

Query: 305 CKYLKENPEIAKTLDKKLREML 326
             +L EN ++A  ++KK++E L
Sbjct: 747 RNFLVENADVADEIEKKIKEKL 768