Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  440 bits (1132), Expect = e-128
 Identities = 213/321 (66%), Positives = 271/321 (84%), Gaps = 1/321 (0%)

Query: 4   NKQKALAAALGQIEKQFGKGSIMRLG-DNRAMDVETISTGSLSLDIALGAGGLPMGRIVE 62
           +KQKAL +AL QIE+QFGKGSIM+LG D+   ++E  STGS+ LDIALG GG+P GRI+E
Sbjct: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75

Query: 63  IFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGE 122
           I+GPESSGKTTLTL  IA  Q++G  CAF+DAEHALDP YA+KLGV++DELL+SQPDTGE
Sbjct: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135

Query: 123 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLK 182
           QALEI + L RSGAV ++VVDSVAALTPK+E+EG+MGD+ +G QAR++SQAMRKLTG + 
Sbjct: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195

Query: 183 QSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETR 242
           +SNC  IFINQIRMKIGVMFG+PETT+GGNALKFY+SVRLDIRR G++K+ +E+VGN T+
Sbjct: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255

Query: 243 IKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKA 302
           +KVVKNK+A PFK+    I+YG+G ++ GELIDLGVK  +V+KSG+W+SY  ++IGQG+ 
Sbjct: 256 VKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRE 315

Query: 303 NACKYLKENPEIAKTLDKKLR 323
           NA +YL++N   A  L+ K+R
Sbjct: 316 NAKQYLRDNTRTALELEDKIR 336