Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., RecA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  407 bits (1045), Expect = e-118
 Identities = 199/322 (61%), Positives = 255/322 (79%)

Query: 5   KQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIF 64
           K KAL A + +IEK FGKGSIM++GD+    VE I TGS++L++ALG GG P GRI+EI+
Sbjct: 20  KLKALQATMEKIEKNFGKGSIMKMGDDSVEQVEVIPTGSIALNVALGVGGYPRGRIIEIY 79

Query: 65  GPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQA 124
           GPESSGKTTL +  IA AQ+ G   AFIDAEHA D  YA KLGV++D L +SQPD GEQA
Sbjct: 80  GPESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDRFYAAKLGVDVDNLWISQPDNGEQA 139

Query: 125 LEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQS 184
           LEI + L RS A+D+IV+DSVAALTPKAEIEG+MGD+ +GLQAR++SQA+RKLTG + ++
Sbjct: 140 LEIAEQLIRSSAIDIIVIDSVAALTPKAEIEGDMGDNKVGLQARLMSQALRKLTGTVSKT 199

Query: 185 NCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRIK 244
              CIFINQ+R KIGVMFGNPETTTGGNALKFYASVR+DIR +  IK+GEEV+G  T++K
Sbjct: 200 RTTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRIDIRGSQPIKDGEEVLGKLTKVK 259

Query: 245 VVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKANA 304
           VVKNK+A PF++A   IM+G+G +  GE+IDLG +  +++KSG+WYSYN  K+GQG+  A
Sbjct: 260 VVKNKVAPPFRKAEFDIMFGEGISHSGEIIDLGAELGIIKKSGSWYSYNDTKLGQGRDAA 319

Query: 305 CKYLKENPEIAKTLDKKLREML 326
              +K+NPE+A+ L+  + E L
Sbjct: 320 KVCIKDNPELAEELEGLIFEAL 341