Pairwise Alignments

Query, 287 a.a., sulfate ABC transporter permease subunit CysW from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  459 bits (1180), Expect = e-134
 Identities = 226/280 (80%), Positives = 251/280 (89%)

Query: 5   QPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIG 64
           +PL+VGE P +KWSLI LA+LL  +LLL+PL+SIFQQAF  G   Y  + + PD+ HAIG
Sbjct: 5   KPLKVGEAPLIKWSLITLAVLLAMLLLLLPLVSIFQQAFVGGWERYIEHLSQPDSLHAIG 64

Query: 65  LTLVVALLTVPINLVFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGT 124
           LTL+VA LTVPINLVFGV+L+W VTRFEF GRK LITLIDIPFAVSPVVAGLLYLLLYG 
Sbjct: 65  LTLMVAALTVPINLVFGVMLAWSVTRFEFPGRKLLITLIDIPFAVSPVVAGLLYLLLYGN 124

Query: 125 SGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVILGASW 184
           SGWLG WL+E DLQ+MFAWPGI+LVT+FVTCPFVARELIPLMQQQG S+EEAAVILGASW
Sbjct: 125 SGWLGAWLFEHDLQVMFAWPGILLVTIFVTCPFVARELIPLMQQQGASEEEAAVILGASW 184

Query: 185 WQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLYEDYQ 244
           WQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLYEDYQ
Sbjct: 185 WQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLYEDYQ 244

Query: 245 SQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQ 284
           ++AAFASASLLA IAL TL+LKALVEWRQ+R  +  +N+Q
Sbjct: 245 AEAAFASASLLALIALFTLMLKALVEWRQQRSLSANNNQQ 284