Pairwise Alignments

Query, 287 a.a., sulfate ABC transporter permease subunit CysW from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (388), Expect = 3e-42
 Identities = 84/247 (34%), Positives = 144/247 (58%), Gaps = 2/247 (0%)

Query: 20  IALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLVVALLTVPINLV 79
           + ++LL V+++LL+P   +  Q      S Y+    DP    +  +T++ AL     N +
Sbjct: 21  LGVSLLFVSLILLLPTTGLIMQTSQMSWSEYWGVIADPRVLASYKVTILSALAASIFNCL 80

Query: 80  FGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLGEWLYERDLQI 139
           FG+LL+W++ R+EF G++ L  L+D+PFA+   VAG+    LY  +G +G  L E  +++
Sbjct: 81  FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAELGIKV 140

Query: 140 MFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVILGASWWQLFRRVTLPNIKWA 199
            +   GIV+  +F + PFV R + P++++    +EEA + LGA+   +F RV LP++  A
Sbjct: 141 AYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHEEEEAGMTLGATDAAVFWRVILPSLWPA 200

Query: 200 LIYGVILTNARAVGEFGAVAVVSGNIR--GETNTLPLHVQLLYEDYQSQAAFASASLLAF 257
           L+ G  L+  R++GEFGAV  ++GN+    E  +L + V+L   D+   +A AS  L+  
Sbjct: 201 LMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFAGASAIASIVLMTS 260

Query: 258 IALLTLL 264
           + LL L+
Sbjct: 261 LLLLLLI 267