Pairwise Alignments

Query, 333 a.a., sulfate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  297 bits (760), Expect = 3e-85
 Identities = 147/333 (44%), Positives = 212/333 (63%), Gaps = 2/333 (0%)

Query: 1   MNRIKSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIK 60
           ++R++    AL        + A+ T+LN SYD  RE +  YN +F+++WQ++  +   ++
Sbjct: 4   LSRLQQATLALTFTSVSFLALAENTLLNVSYDPTREFYREYNQLFSQYWQKQGHEAPTVR 63

Query: 61  QSHAGSSAQARSILQGLAADVVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTA 120
           QSH GS +QARS++ GL ADVVT     DV  L  K  LIP NWQ+ LP+ SSPY ST  
Sbjct: 64  QSHGGSGSQARSVIDGLEADVVTLALAYDVDALRQKADLIPENWQSRLPHNSSPYTSTIV 123

Query: 121 FLVRKGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQKQFGQDNQVQQDE 180
            LVRKGNPKNI DW+DL R  V+ + PNPKTSG AR+ YLAA G+A KQ+G + +    E
Sbjct: 124 LLVRKGNPKNIHDWNDLARKGVEVITPNPKTSGGARWNYLAAWGYALKQYGSEEKAL--E 181

Query: 181 FLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSI 240
           F+ +   NV V D+G RGAT +FV+R IGDV I +E+E     +Q G  +++++VP  SI
Sbjct: 182 FVTQIYKNVPVLDSGARGATNTFVQRQIGDVFIAWENEAFLAVEQLGKGEFEIIVPSVSI 241

Query: 241 LAEFPVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPA 300
           LAE PVA+V+K   R GT  +A  Y++ LY++ AQ L A+  YR  +  +  ++ ++FP 
Sbjct: 242 LAEPPVAIVDKNVDRKGTRKLAEAYLAQLYTDEAQHLAAKHFYRPANPNISKQYKDKFPQ 301

Query: 301 VELLTVEGIAGGWEQAMQTQFANGAKLDQLLRR 333
           + L T++ + GGW +A QT F +G   D +L +
Sbjct: 302 LTLFTIDDVFGGWNKAQQTHFNDGGYFDTILTK 334