Pairwise Alignments

Query, 333 a.a., sulfate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  540 bits (1392), Expect = e-158
 Identities = 270/329 (82%), Positives = 292/329 (88%)

Query: 5   KSTLTALLLAGSFQASAADQTILNSSYDIARELFVAYNPVFAEHWQQKTGKTVEIKQSHA 64
           K+ L  LLL  S   +AADQT+LNSSYDI+RELF AYNPVFA+HWQ+KTGKTVEIKQSHA
Sbjct: 7   KALLGTLLLGASLNVAAADQTLLNSSYDISRELFNAYNPVFAKHWQEKTGKTVEIKQSHA 66

Query: 65  GSSAQARSILQGLAADVVTFNQVTDVQILHDKGKLIPANWQTLLPNASSPYYSTTAFLVR 124
           GSSAQARSILQGL ADVVTFNQVTDVQILHD+GKLIP NWQ LLPNASSPYYST AFLVR
Sbjct: 67  GSSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVR 126

Query: 125 KGNPKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQKQFGQDNQVQQDEFLKK 184
           KGNPK I DW DL +DDVK VFPNPKTSGNARYTYLAALGFAQK +G+DN+   D FLKK
Sbjct: 127 KGNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKK 186

Query: 185 FLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEF 244
           FL NVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGAD YQVVVPKTSILAEF
Sbjct: 187 FLGNVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVVPKTSILAEF 246

Query: 245 PVAVVEKVAKRNGTYDVATEYVSYLYSEPAQRLLAEFNYRVHDAKVQAEFAERFPAVELL 304
           PVAVVEK AKRNGT ++ATEY+SYLYSE +QRLLA FNYRVH+ KV AEF ++FP VEL+
Sbjct: 247 PVAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVELM 306

Query: 305 TVEGIAGGWEQAMQTQFANGAKLDQLLRR 333
           TVE I G W+ AM+TQFANGAKLDQLL+R
Sbjct: 307 TVEQIIGNWDNAMKTQFANGAKLDQLLKR 335