Pairwise Alignments

Query, 295 a.a., cysteine synthase CysM from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., cysteine synthase A (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (536), Expect = 2e-59
 Identities = 129/302 (42%), Positives = 180/302 (59%), Gaps = 20/302 (6%)

Query: 11  VGQTPLVRLQRLNAGRSTVLVKLEGNNPAGSVKDRPALNMIVQAEARGSLQPGDTIIEAT 70
           +G TPLVRL R++ G   VL K+E  NP+ SVK R   NMI  AE +G L     +IE T
Sbjct: 12  IGNTPLVRLNRVSKGN--VLAKVEARNPSFSVKCRIGANMIWDAEKKGLLTKDKELIEPT 69

Query: 71  SGNTGIALAMAAAIKGYKMILIMPDNATQERKDSMRAYGAELILVSKEQGMEGARDLALQ 130
           SGNTGIALA  AA +GYK+ L MP+  + ER+  ++A GA L+L    +GM+GA D A +
Sbjct: 70  SGNTGIALAYVAAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGMKGAIDKAEE 129

Query: 131 MQQEGKGK--VLDQFNNLDNPDAHYRSTGPEIWQQSQGKITHFVSSMGTTGTIMGVSRYL 188
           ++Q    K  +L QF+N  NP+ H ++TGPEIW  + G++   V+ +GT GTI GVSRY+
Sbjct: 130 LRQSAPEKYLILGQFDNPANPEIHEKTTGPEIWNDTDGEVDVVVAGVGTGGTITGVSRYI 189

Query: 189 KQ-QNPQIQIIGLQPSEGSAI----------PG---IRRWPQAYLPGIFDAARVDQVLDV 234
           KQ Q   I  + ++P++   I          PG   I+     ++PG  D   +D+V  V
Sbjct: 190 KQTQGKAITSVAVEPADSPVIGQTMAGQPVQPGPHKIQGIGAGFIPGNLDLDVIDRVEAV 249

Query: 235 TQTDAEQTARALAREEGICAGVSSGGAVFAALQIAQ--QNPGSVVVAIVCDRGDRYLSSG 292
           T  +A + A+ L +EEGI  G+SSG AV AA +IA   +  G  +V I+    +RYLSS 
Sbjct: 250 TNEEAIEMAQRLMKEEGILVGISSGAAVVAANRIADLPEFEGKNIVVILPSAAERYLSSV 309

Query: 293 LF 294
           LF
Sbjct: 310 LF 311