Pairwise Alignments

Query, 295 a.a., cysteine synthase CysM from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., cysteine synthase B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  455 bits (1171), Expect = e-133
 Identities = 229/290 (78%), Positives = 258/290 (88%), Gaps = 3/290 (1%)

Query: 6   TLEDYVGQTPLVRLQRLNAGRSTVLVKLEGNNPAGSVKDRPALNMIVQAEARGSLQPGDT 65
           T+E  +GQTPLVRLQRL+ G STVL+KLEGNNPAGSVKDR ALNMI QAE R  + PGDT
Sbjct: 2   TIEACIGQTPLVRLQRLDCGSSTVLLKLEGNNPAGSVKDRAALNMINQAELRQEIAPGDT 61

Query: 66  IIEATSGNTGIALAMAAAIKGYKMILIMPDNATQERKDSMRAYGAELILVSKEQGMEGAR 125
           +IEATSGNTGIALAMAAAIKGYKMILIMP N+TQERKD+M+AYGAEL+LV     ME AR
Sbjct: 62  LIEATSGNTGIALAMAAAIKGYKMILIMPSNSTQERKDAMQAYGAELLLVDN---MEAAR 118

Query: 126 DLALQMQQEGKGKVLDQFNNLDNPDAHYRSTGPEIWQQSQGKITHFVSSMGTTGTIMGVS 185
           DLAL +Q EGKGKVLDQFNN DN +AH+ +TGPEIWQQSQGKITHFVSSMGTTGTIMGVS
Sbjct: 119 DLALALQAEGKGKVLDQFNNQDNANAHFLTTGPEIWQQSQGKITHFVSSMGTTGTIMGVS 178

Query: 186 RYLKQQNPQIQIIGLQPSEGSAIPGIRRWPQAYLPGIFDAARVDQVLDVTQTDAEQTARA 245
           +YLK +NP I I+GLQP++GS+IPGIRRWPQ YLPGIFDAARVD ++D+ + DA+  ARA
Sbjct: 179 KYLKSRNPDITIVGLQPADGSSIPGIRRWPQEYLPGIFDAARVDLMMDIEEQDAKAMARA 238

Query: 246 LAREEGICAGVSSGGAVFAALQIAQQNPGSVVVAIVCDRGDRYLSSGLFS 295
           LAREEGICAGVSSGGAV+AAL++A+Q PGSVVVAIVCDRGDRYLSSGLFS
Sbjct: 239 LAREEGICAGVSSGGAVYAALELARQYPGSVVVAIVCDRGDRYLSSGLFS 288