Pairwise Alignments

Query, 295 a.a., cysteine synthase CysM from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., cysteine synthase B (RefSeq) from Shewanella sp. ANA-3

 Score =  474 bits (1219), Expect = e-138
 Identities = 236/295 (80%), Positives = 265/295 (89%), Gaps = 3/295 (1%)

Query: 1   MSDFPTLEDYVGQTPLVRLQRLNAGRSTVLVKLEGNNPAGSVKDRPALNMIVQAEARGSL 60
           MSDFPT+E  +GQTPLVRLQRL+ G STVL+KLEGNNPAGSVKDR ALNMI+QAE R  +
Sbjct: 1   MSDFPTIEACIGQTPLVRLQRLDCGSSTVLLKLEGNNPAGSVKDRAALNMIIQAELRQEI 60

Query: 61  QPGDTIIEATSGNTGIALAMAAAIKGYKMILIMPDNATQERKDSMRAYGAELILVSKEQG 120
            PGDT+IEATSGNTGIALAMAAAIKGYKMILIMP N+TQERKD+M+AYGAEL+LV     
Sbjct: 61  APGDTLIEATSGNTGIALAMAAAIKGYKMILIMPSNSTQERKDAMQAYGAELLLVDN--- 117

Query: 121 MEGARDLALQMQQEGKGKVLDQFNNLDNPDAHYRSTGPEIWQQSQGKITHFVSSMGTTGT 180
           ME ARDLAL +Q +GKGKVLDQFNN DN +AH+++TGPEIWQQSQGKITHFVSSMGTTGT
Sbjct: 118 MEAARDLALDLQAQGKGKVLDQFNNQDNANAHFQTTGPEIWQQSQGKITHFVSSMGTTGT 177

Query: 181 IMGVSRYLKQQNPQIQIIGLQPSEGSAIPGIRRWPQAYLPGIFDAARVDQVLDVTQTDAE 240
           IMGVS+YLK +NP I I+GLQP++GS+IPGIRRWPQ YLPGIFDAARVD V+D+ + DA+
Sbjct: 178 IMGVSKYLKSRNPDITIVGLQPADGSSIPGIRRWPQEYLPGIFDAARVDAVMDIEEQDAK 237

Query: 241 QTARALAREEGICAGVSSGGAVFAALQIAQQNPGSVVVAIVCDRGDRYLSSGLFS 295
             AR LAREEGICAGVSSGGAVFAAL+IA+QNPGSVVVAIVCDRGDRYLSSGLFS
Sbjct: 238 AMARTLAREEGICAGVSSGGAVFAALEIARQNPGSVVVAIVCDRGDRYLSSGLFS 292