Pairwise Alignments

Query, 295 a.a., cysteine synthase CysM from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., cysteine synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  210 bits (534), Expect = 4e-59
 Identities = 130/302 (43%), Positives = 178/302 (58%), Gaps = 20/302 (6%)

Query: 11  VGQTPLVRLQRLNAGRSTVLVKLEGNNPAGSVKDRPALNMIVQAEARGSLQPGDTIIEAT 70
           +G TPLVRL R++ G+  VL K+E  NP+ SVK R   NMI  AE +G L     +IE T
Sbjct: 12  IGNTPLVRLNRVSQGK--VLAKVEARNPSFSVKCRIGANMIWDAEKKGLLTKDHELIEPT 69

Query: 71  SGNTGIALAMAAAIKGYKMILIMPDNATQERKDSMRAYGAELILVSKEQGMEGARDLALQ 130
           SGNTGIALA  AA +GYK+ L MP+  + ER+  ++A GA L+L    +GM+GA D A +
Sbjct: 70  SGNTGIALAYVAAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGMKGAIDKAEE 129

Query: 131 MQQEGKGK--VLDQFNNLDNPDAHYRSTGPEIWQQSQGKITHFVSSMGTTGTIMGVSRYL 188
           ++Q    K  +L QFNN  NP+ H ++TGPEIW  + G +  FV+ +GT GTI GVSRYL
Sbjct: 130 IRQSAPEKYIMLQQFNNPANPEIHEKTTGPEIWNDTDGAVDVFVAGVGTGGTITGVSRYL 189

Query: 189 KQ-QNPQIQIIGLQPSEGSAI----------PG---IRRWPQAYLPGIFDAARVDQVLDV 234
           K+     I  + ++P++   I          PG   I+     ++PG  D   +D+V  V
Sbjct: 190 KKVAGKAITSVAVEPADSPVITQTLAGLPVQPGPHKIQGIGAGFIPGNLDLELIDRVETV 249

Query: 235 TQTDAEQTARALAREEGICAGVSSGGAVFAALQIA--QQNPGSVVVAIVCDRGDRYLSSG 292
           T  +A   AR L +EEGI  G+SSG AV AA +IA   +     +V I+    +RYLSS 
Sbjct: 250 TNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAALPEFADKNIVVILPSAAERYLSSV 309

Query: 293 LF 294
           LF
Sbjct: 310 LF 311