Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas syringae pv. syringae B728a

 Score =  965 bits (2494), Expect = 0.0
 Identities = 507/853 (59%), Positives = 626/853 (73%), Gaps = 3/853 (0%)

Query: 12  LSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGASAGEPI 71
           LS HTPMMQQY +LK ++ D L+FYRMGDFYE+FY+DAK+A++LLDI+LT RG SAG+ I
Sbjct: 8   LSAHTPMMQQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSI 67

Query: 72  PMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLS 131
           PM G+P+HA EGYLAKLV++GESV ICEQIGDPATSKGPV+R+VVRI+TPGT++DEALL 
Sbjct: 68  PMCGIPYHAAEGYLAKLVKLGESVVICEQIGDPATSKGPVDRQVVRIITPGTISDEALLD 127

Query: 132 ERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSP 191
           ER DNLIAA+      FG A +DITSG F + E +  E + AEL+R +P ELL P+D+ P
Sbjct: 128 ERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERINPVELLIPDDWPP 187

Query: 192 VHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQYVKD 251
                 R+G+RRR  W+FE D+A + L QQF T+DL GFG E   L + AAGCL+ Y K+
Sbjct: 188 GLPAEKRRGSRRRAPWDFERDSAHKSLCQQFATQDLKGFGCENLTLAIGAAGCLLSYAKE 247

Query: 252 TQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATPMGSRM 311
           TQRTALPH+RSL  +R D +VILDAA+RRNLEL  NL+GG DNTL  V+D C T MG+R+
Sbjct: 248 TQRTALPHLRSLRHERLDDTVILDAASRRNLELDTNLSGGRDNTLQSVMDRCQTAMGTRL 307

Query: 312 LKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRD 371
           L RW+++P+RD   L  R  +IT   E   +  L P LK+IGDIERILAR+ LR+ARPRD
Sbjct: 308 LTRWLNRPLRDLTILQARQTSITCFLERYRFENLQPQLKEIGDIERILARIGLRNARPRD 367

Query: 372 LARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGV 431
           LARLR A+  LPEL   MS+L  PHL +L   A    EL DLL+RAI +NPP VIRDGGV
Sbjct: 368 LARLRDALSALPELQQAMSDLDAPHLQQLAQTAGTYPELADLLQRAIIDNPPAVIRDGGV 427

Query: 432 IADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHL 491
           +  GY AELD+ + L+  A +FL  LEA E+ R G+  LKVGYN VHG++I++   Q+  
Sbjct: 428 LKTGYDAELDDLQSLSENAGQFLIDLEAREKARTGLGNLKVGYNRVHGYFIELPSKQAEQ 487

Query: 492 VPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQ 551
            P  Y+RRQTLK AER+I  ELK+ EDK L++KSRALA EK L+E L + L+ HL  LQ 
Sbjct: 488 APADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLAPLQD 547

Query: 552 LAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIANPIELN 611
            AA++A+LDVL NLAERA NL+   P  V E  + I+ GRHPVVE+V++ PF+AN + L+
Sbjct: 548 TAAALAELDVLSNLAERALNLDLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFVANDLALD 607

Query: 612 PQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDDLA 671
              RML+ITGPNMGGKSTYMRQTALI L+AHIGS+VPA S  +  +DRIFTRIG+SDDLA
Sbjct: 608 DSTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLA 667

Query: 672 SGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGAMTL 731
            GRSTFMVEM+ETANILHNAT  SLVLMDE+GRGTST+DGLSLAWA+AE LA ++ A TL
Sbjct: 668 GGRSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLA-QLRAYTL 726

Query: 732 FATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKP 791
           FATHYFELT LP   P + NVHL+A EH + I F+H V  G AS+SYGLAVA LAGVP  
Sbjct: 727 FATHYFELTVLPESEPLVTNVHLNATEHNERIVFLHRVLPGPASQSYGLAVAQLAGVPGK 786

Query: 792 VIKNARAKLQQLELLSSQPAETR-KPSRVDIANQLSLIPE-PSAVEQALAGVDPDQLTPR 849
           VI  A+  LQ+LE  S    + R KP +  +  Q  +    P  V   L+ V  D +TPR
Sbjct: 787 VISRAKEHLQRLETTSLPHEQPRAKPGKPAVPQQSDMFASLPHPVLDELSKVKVDDMTPR 846

Query: 850 QALDMLYQLKKLL 862
           QALD+LY L+  L
Sbjct: 847 QALDLLYTLQTRL 859