Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 853 a.a., DNA mismatch repair protein MutS from Klebsiella michiganensis M5al

 Score = 1198 bits (3100), Expect = 0.0
 Identities = 612/859 (71%), Positives = 712/859 (82%), Gaps = 10/859 (1%)

Query: 7   SPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGAS 66
           S  E+L  HTPMMQQYL+LKA++P+ILLFYRMGDFYELFYDDAKRAS+LLDISLTKRGAS
Sbjct: 2   STLENLDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGAS 61

Query: 67  AGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTD 126
           AGEPIPMAG+P HAVE YLAKLV  GESVAICEQIGDPAT+KGPVERKVVRIVTPGT++D
Sbjct: 62  AGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTISD 121

Query: 127 EALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFP 186
           EALL ER DNL+AAI+     FGYAT+DI+SGRF+LSEP   E MAAELQRT+P ELL+ 
Sbjct: 122 EALLQERQDNLLAAIWQDGKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYA 181

Query: 187 EDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLI 246
           EDF+   L+  R+G RRRP+WEFE+DTA+QQLN QFGTRDLVGFGVE A  GLCAAGCL+
Sbjct: 182 EDFAESSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLL 241

Query: 247 QYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATP 306
           QYVKDTQRT+LPHIRS+T +RQ  S+I+DAATRRNLE+T NLAGG +NTLA VLD   TP
Sbjct: 242 QYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGFENTLASVLDCTVTP 301

Query: 307 MGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRS 366
           MGSRMLKRW+H P RD A L +R   I  L+E   Y EL PVL+Q+GD+ERILARLALR+
Sbjct: 302 MGSRMLKRWLHMPARDTAVLVERQQTIGALQEH--YTELQPVLRQVGDLERILARLALRT 359

Query: 367 ARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVI 426
           ARPRDLAR+RHA QQLP L ++++++    +  LR       EL +LLERAI + PPV++
Sbjct: 360 ARPRDLARMRHAFQQLPALRAMLADVDCAPVQRLREKMGEFSELRELLERAIIDAPPVLV 419

Query: 427 RDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSR 486
           RDGGVIA GY AELDEWR LA+GAT++L+RLE  ER+R G+DTLKVGYN VHG+YIQ+SR
Sbjct: 420 RDGGVIAPGYHAELDEWRGLADGATDYLDRLEVRERERLGLDTLKVGYNAVHGYYIQISR 479

Query: 487 GQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHL 546
           GQS   P HYVRRQTLKNAERYII ELK++EDKVL SK +ALALEKQL++ELFD+L+PHL
Sbjct: 480 GQSQHAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDMLLPHL 539

Query: 547 EQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIAN 606
             LQQ A+++A+LDVL NLAERAE L YC PT   + GI I  GRHPVVE+V+ EPFIAN
Sbjct: 540 GDLQQSASALAELDVLVNLAERAETLNYCCPTFSDKPGIRISEGRHPVVEQVLKEPFIAN 599

Query: 607 PIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGA 666
           P+ L PQRRMLIITGPNMGGKSTYMRQTALIAL+A+IGSYVPAE   IGP+DRIFTR+GA
Sbjct: 600 PLHLAPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAEKVDIGPIDRIFTRVGA 659

Query: 667 SDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEI 726
           +DDLASGRSTFMVEMTETANILHNAT +SLVLMDEIGRGTSTYDGLSLAWA AE LA +I
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKI 719

Query: 727 GAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLA 786
            A+TLFATHYFELT+LP  +  +ANVHLDA+EHGD IAFMH+VQ+GAASKSYGLAVA LA
Sbjct: 720 KALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALA 779

Query: 787 GVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEP---SAVEQALAGVDP 843
           GVPK VIK AR KL++LE ++   A T    +VD   Q+SL+  P   S   +AL  +DP
Sbjct: 780 GVPKEVIKRARQKLRELESIAPSAAAT----QVD-GTQMSLLSAPEETSPAVEALENLDP 834

Query: 844 DQLTPRQALDMLYQLKKLL 862
           D LTPRQAL+ +Y+LK L+
Sbjct: 835 DSLTPRQALEWIYRLKSLV 853