Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Lipoprotein NlpD from Pseudomonas fluorescens FW300-N2E2

 Score = 77.4 bits (189), Expect = 6e-19
 Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 7/120 (5%)

Query: 196 WPTKGRVIKNF--SAGDQGNK---GIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIII 250
           WP  GR++  F  + GD       G+ I+   G  V A   G VV++ + LRG G L+I+
Sbjct: 307 WPVNGRLLARFGETRGDDTRTKWDGVMISASAGSQVHAVHGGRVVFA-DWLRGAGLLVIL 365

Query: 251 KHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSS-GTNSVRLHFEIRYQGKSVNPKRY 309
            H   YLS Y HN  LL   G  V+AG+ I+T+G+S G ++  L+F IR QG+  +P ++
Sbjct: 366 DHGNGYLSLYGHNQTLLKSAGDVVKAGESISTVGNSGGQDTPALYFAIRQQGRPSDPAQW 425