Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Peptidase M23B from Pseudomonas syringae pv. syringae B728a

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 8/211 (3%)

Query: 106 AATVAVASSTSASVAKAATTATV-AQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTK 164
           A  +     T A  A+ A  A   A   ++ +  K  +     ++N +     K+ D+  
Sbjct: 227 AKVLKTIEETLARQAREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPA 286

Query: 165 TKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAG---DQGNK--GIDIA 219
            +  V+  G    +  V+   P  E   K  WP  GR++  F      D+  K  G+ I+
Sbjct: 287 PRRPVKAPGAVVSSAGVSYGGPFAEAKGKLPWPIDGRLLARFGEARGDDERTKWDGVMIS 346

Query: 220 GQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQK 279
              G  V A   G VV++ + LRG G L+I+ H   YL+ Y HN  LL   G  V+AG+ 
Sbjct: 347 AAAGSQVRAVHGGRVVFA-DWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIVKAGEA 405

Query: 280 IATMGSS-GTNSVRLHFEIRYQGKSVNPKRY 309
           I+T+G+S G ++  L+F IR QG+  +P ++
Sbjct: 406 ISTVGNSGGQDTAALYFAIRQQGRPSDPAQW 436