Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., M24/M37 family peptidase (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 9/139 (6%)

Query: 179 VNVAKAKPS----DEKIAKWLWPTKGRVIKNFSAGDQGN---KGIDIAGQRGQAVVATAD 231
           V   KA P       +  K  WPTKGR+ + F     G    KG+ ++   GQ++ A AD
Sbjct: 238 VKAVKASPKLIGLGNQRGKLNWPTKGRLSEAFGNTRSGQIKWKGVLLSAPEGQSINAIAD 297

Query: 232 GTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMG-SSGTNS 290
           G V+Y+ + L+G+G ++++ H + Y+S Y H   LL   G TV +G+ IA +G S G   
Sbjct: 298 GKVIYA-DWLKGFGMVLVLDHGQGYMSLYGHAQALLKSPGDTVNSGETIALVGRSGGQTQ 356

Query: 291 VRLHFEIRYQGKSVNPKRY 309
             L+FEIR++G++V+P  Y
Sbjct: 357 PGLYFEIRHKGQAVDPANY 375