Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., peptidase M23B (RefSeq) from Shewanella loihica PV-4

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 2/118 (1%)

Query: 194 WLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHN 253
           WL    G     F+     +KGID AG+ G  VVATA G V ++GN   GYG L+ I H 
Sbjct: 178 WLSSPYGLRNDPFNGRRTMHKGIDFAGKEGADVVATAGGVVTWAGNMF-GYGELVEIDHG 236

Query: 254 EHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNPKRYL 310
               + Y HN  L    G  V  G+ IA MGS+G +    +H+E+   G+ ++PK+Y+
Sbjct: 237 NGLRTRYGHNKSLSVAVGDVVAKGESIAKMGSTGRSTGPHVHYEVLRGGQQIDPKKYV 294