Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., metalloendopeptidase-like membrane protein from Dechlorosoma suillum PS

 Score =  190 bits (482), Expect = 4e-53
 Identities = 126/312 (40%), Positives = 168/312 (53%), Gaps = 35/312 (11%)

Query: 8   LGLLLFCSLLFGCTAPTPAPVSGLGKDYNKVERG------SYRGSYYEVKKGDTLYFIAY 61
           +  LLF   L GC +  PAPV         VERG      +    +Y VKKGDTLY IA 
Sbjct: 16  IAALLF---LAGCASHAPAPV---------VERGVPSKPAAASKDFYTVKKGDTLYSIAL 63

Query: 62  LTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGGAATVAVASSTSASVAK 121
              +D  D+ ++N+L  P  I  GQ++++     TPP     GGAA  AVA      V +
Sbjct: 64  DNGQDYKDVAAWNNLENPNRILVGQQLRV-----TPP----DGGAAGTAVAKPIGGGVVE 114

Query: 122 AATT--ATVAQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNVNV 179
           + +     V    S +   +        S     K   +   Q    +  EPV  +    
Sbjct: 115 SRSLDGGPVPAAASDTLKREPKAGKEAYSDQAWAKAQNQNNAQGAAAKPAEPVRSE---A 171

Query: 180 NVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGN 239
             A A P+   +  W WP  G+ I  F+  +  NKG+DIAG+ G+ V+A ADG VVYSG+
Sbjct: 172 PAAAAAPAAADVT-WAWPAGGKSIAGFN--EATNKGVDIAGKLGEPVLAAADGKVVYSGS 228

Query: 240 ALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRY 299
            LRGYG L+IIKH+  +LSAYAHN+ +L KEGQ+V  GQKIA MG+S T+ V+LHFEIR 
Sbjct: 229 GLRGYGKLVIIKHDATFLSAYAHNNNILVKEGQSVTRGQKIAEMGNSDTDQVKLHFEIRR 288

Query: 300 QGKSVNPKRYLP 311
           QGK V+P +YLP
Sbjct: 289 QGKPVDPTQYLP 300