Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Peptidase M23 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)

Query: 149 QNLTKKDPVKTVDQTKTKEYVEPVGKQNV------NVNVAKAKPSDEKIAKWLWPTKGRV 202
           Q L  +     + Q  T   +E V +Q +      N  V  A PS      ++  T G  
Sbjct: 131 QELLARKMHSFLQQLSTDVRLEEVRQQELVRTLRDNREVLAATPSIWPADGYISSTFGMR 190

Query: 203 IKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRG-YGNLIIIKHNEHYLSAYA 261
           +  F+   + +KGID+  + G  + + A GTV ++  A+ G YGN ++++H     + YA
Sbjct: 191 VSPFTGKGEFHKGIDVINRPGTPIYSPARGTVTFA--AVDGAYGNCVVLQHGGGLATRYA 248

Query: 262 HNDQLLAKEGQTVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNPKRYL 310
           H  + + KEGQT+  G  I  +G+SG +    LH+E+R  G  VNP RY+
Sbjct: 249 HMQRFVLKEGQTINRGDLIGYIGNSGRSTGPHLHYEVRLNGVCVNPMRYI 298