Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., peptidase M23 from Klebsiella michiganensis M5al

 Score =  198 bits (503), Expect = 1e-55
 Identities = 114/267 (42%), Positives = 143/267 (53%), Gaps = 60/267 (22%)

Query: 45  GSYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTG 104
           GS Y VK+GDTLY I+  T   V DL   N+++PPYTI  GQK+KL            +G
Sbjct: 27  GSTYTVKRGDTLYAISRSTGTSVRDLARLNNISPPYTIEVGQKLKL-----------NSG 75

Query: 105 GAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTK 164
              T    +S   S  K     T +  V +SS                            
Sbjct: 76  SGTTAKAGASGKKSSVKRTAAVTPSSAVPQSS---------------------------- 107

Query: 165 TKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQ 224
                 PVG++                  W WPT G+V+  +S  D GNKGIDIAG+RGQ
Sbjct: 108 ----WPPVGQRC-----------------WRWPTSGKVVLPYSTSDGGNKGIDIAGKRGQ 146

Query: 225 AVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMG 284
            V A   G VVY GN LRGYGNLI+IKHNE Y+SAYAHND+L+   GQ+V+ GQ+IATMG
Sbjct: 147 PVYAAGAGKVVYVGNQLRGYGNLIMIKHNEDYISAYAHNDKLMVNNGQSVKIGQQIATMG 206

Query: 285 SSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           SS  +SVRLHF+IRY+  +++P RYLP
Sbjct: 207 SSDADSVRLHFQIRYRATAIDPLRYLP 233