Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., lipoprotein NlpD from Klebsiella michiganensis M5al

 Score =  243 bits (621), Expect = 4e-69
 Identities = 130/282 (46%), Positives = 179/282 (63%), Gaps = 11/282 (3%)

Query: 33  KDYNKVERGSYRG-SYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLW 91
           + Y  + +GSY G S Y VK+GDTL++IA++T  D  DL   N++  PY ++ GQ +++ 
Sbjct: 97  RKYGDIPKGSYTGGSTYTVKRGDTLFYIAWVTGNDFRDLAQRNNIPAPYGLNVGQTLQVG 156

Query: 92  LPNYTPPAYGGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNL 151
             N +     G    A  +V +S    +   +   + A   S+ + T +  +G  ++  +
Sbjct: 157 --NASGQPITGDNPVAQASVKASNGGMLTANSAQKSTAVVASQPTITYSESSGEQSANKM 214

Query: 152 TKKDPVKTVDQTKTKEYVEPVGKQNVNV--NVAKAKPSDEKIAKWLWPTKGRVIKNFSAG 209
              +      +  T   V PV    V+   + A +  +   I+ W WPT G+VI+NFS  
Sbjct: 215 LPNN------KPATTTAVAPVTAPAVSTTQSTASSTSTSSPISSWRWPTDGKVIENFSGA 268

Query: 210 DQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAK 269
           + GNKGIDIAG +GQA+VATADG VVY+GNALRGYGNLIIIKHN+ YLSAYAHND +L K
Sbjct: 269 EGGNKGIDIAGSKGQAIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVK 328

Query: 270 EGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           E Q ++AGQKIATMGS+GT+S RLHFEIRY+GKSVNP +YLP
Sbjct: 329 EQQDIKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLQYLP 370