Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., peptidase, M23/M37 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 24/200 (12%)

Query: 127 TVAQTVSKSSNTKNVQNG--STNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNV------N 178
           T  QT    S T+++  G    + Q L  +     + Q  T   +E V +Q +      N
Sbjct: 108 TEVQTSMGGSRTEDLSKGYLPLHRQELLARKMHTFIKQLATDVRLEEVRQQELLHALRAN 167

Query: 179 VNVAKAKPSDEKIAKWLWPTKGRVIKNF-------SAGDQGNKGIDIAGQRGQAVVATAD 231
            ++  A PS       +WPT+G +   F       ++  + +KG+DI  + G  + A A 
Sbjct: 168 RDILAATPS-------IWPTEGFISSTFGSRKSPFTSRGEFHKGLDINNRPGTPIWAPAR 220

Query: 232 GTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSG-TNS 290
           GTV ++G     YGN +I++H     + YAH  + + KEGQ++Q G  I  +GSSG T  
Sbjct: 221 GTVTFAGTD-GAYGNCVILQHGAGLSTRYAHMQRFVVKEGQSIQRGDIIGYVGSSGRTTG 279

Query: 291 VRLHFEIRYQGKSVNPKRYL 310
             LH+E+R  G  VNP RY+
Sbjct: 280 PHLHYEVRVNGVCVNPMRYI 299