Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., peptidase M23B (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 2/103 (1%)

Query: 209 GDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLA 268
           G + +KG D A   G  + ATADG VV +G    G+G ++ I+H   Y + YAH  +L  
Sbjct: 334 GTRMHKGTDFAAAHGTPIYATADGVVVDAGWH-SGFGRMVKIRHAFGYQTVYAHMSKLRV 392

Query: 269 KEGQTVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNPKRYL 310
           KEGQ V  G +I  MGS+G +  V LH+E+   GK VNP  ++
Sbjct: 393 KEGQRVSRGDRIGDMGSTGRSTGVHLHYEVHQSGKPVNPMTFI 435