Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., lipoprotein NlpD from Paraburkholderia bryophila 376MFSha3.1

 Score =  162 bits (409), Expect = 1e-44
 Identities = 106/274 (38%), Positives = 135/274 (49%), Gaps = 41/274 (14%)

Query: 47  YYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIH---------PGQKIKLWLPNYTP 97
           YY VK GDTLY IA    ++  D+ ++N+L  P  I          PG       P  T 
Sbjct: 72  YYRVKPGDTLYRIALENGQNYRDISAWNNLTNPNQIEVDQLLRVVPPGANTAALTPGVTT 131

Query: 98  PAYGGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNLTKKDPV 157
              G TG A   A  + TS S   AA  A      + ++N       ST +         
Sbjct: 132 APIGSTG-AVQGAPLNGTSPSAGGAAGVAAPPIYGTTANNAALTPPSSTGAAGAASDSSA 190

Query: 158 KTVDQTKTKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGID 217
                             + NVN A             WP +G ++  F+  D  NKG++
Sbjct: 191 GA----------------SGNVNFA-------------WPVRGPLLGTFN--DSTNKGVN 219

Query: 218 IAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAG 277
           I G  G AV A+ADG VVY+GN LRGYGNLIIIKH+  YL+AYAHN  L+ KEG  V  G
Sbjct: 220 IGGAAGDAVKASADGRVVYAGNGLRGYGNLIIIKHDATYLTAYAHNRSLMVKEGDAVTKG 279

Query: 278 QKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           QKIA MG+S ++ V LHFE+R QGK V+P +YLP
Sbjct: 280 QKIAEMGNSDSDRVMLHFEVRRQGKPVDPLKYLP 313