Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., peptidase M23 from Burkholderia phytofirmans PsJN

 Score =  164 bits (414), Expect = 3e-45
 Identities = 102/267 (38%), Positives = 140/267 (52%), Gaps = 27/267 (10%)

Query: 47  YYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGGA 106
           YY VK GDTLY IA    ++  D+ ++N+L  P  I   Q +++  P     A   T G 
Sbjct: 72  YYRVKPGDTLYRIALENGQNYRDISAWNNLTNPNQIEVDQLLRVVPPGANTAAL--TPGV 129

Query: 107 ATVAVASSTSASVAKAATTATVAQTVSKSSNTKN--VQNGSTNSQNLTKKDPVKTVDQTK 164
           +T  + S  +   A   +T   A   S ++      +   +TN+ +LT          + 
Sbjct: 130 STAPIGSGGAVQSAPLGSTPLAAGGTSGAAGVAAPPIYGSTTNNASLTPPATPGAASDSN 189

Query: 165 TKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQ 224
                        + NVA A           WP +G ++  F+  D  NKG++I G  G 
Sbjct: 190 A----------GASGNVAFA-----------WPVRGPLLGTFN--DSTNKGVNIGGAAGD 226

Query: 225 AVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMG 284
            V A+ADG VVY+GN LRGYGNLIIIKH+  YL+AYAHN  L+ KEG  V  GQKIA MG
Sbjct: 227 PVKASADGRVVYAGNGLRGYGNLIIIKHDATYLTAYAHNRSLMVKEGDAVTKGQKIAEMG 286

Query: 285 SSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           +S ++ V LHFE+R QGK V+P +YLP
Sbjct: 287 NSDSDRVMLHFEVRRQGKPVDPLKYLP 313