Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., peptidase M23B (RefSeq) from Shewanella sp. ANA-3

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 17/182 (9%)

Query: 143 NGSTNSQNLTKKDPVKTVDQTKTKEY----VEPVGKQNVNVNVAKA---KPS----DEKI 191
           N   + + LT K+  +T++ TK  E     +E    + V     KA    PS    D++ 
Sbjct: 196 NQEQDQRQLTLKELQRTLN-TKGAELEQLQIEEASLKRVVEQALKAMRDNPSMEGFDKQG 254

Query: 192 AKWLWPTKGRVIKNFSAGDQGN---KGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLI 248
            K  WPTKGRV  +F +   G    KG  ++   GQ + A + G V+Y+ + L+G+G ++
Sbjct: 255 GKLKWPTKGRVSASFGSPRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYA-DWLKGFGMVM 313

Query: 249 IIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMG-SSGTNSVRLHFEIRYQGKSVNPK 307
           +I H + Y+S Y H   LL   G  V+ G+ IA +G S G     L+FEIRY+G++V+P 
Sbjct: 314 VIDHGKGYMSLYGHAQALLKSPGDMVKTGEAIALVGRSGGQTEPGLYFEIRYKGQAVDPA 373

Query: 308 RY 309
           +Y
Sbjct: 374 KY 375