Pairwise Alignments

Query, 361 a.a., tRNA pseudouridine(13) synthase TruD from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., tRNA pseudouridine(13) synthase TruD from Klebsiella michiganensis M5al

 Score =  255 bits (651), Expect = 1e-72
 Identities = 155/334 (46%), Positives = 203/334 (60%), Gaps = 6/334 (1%)

Query: 8   LAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVANELAKAC 67
           L YL GKP  +  LKA PE F V E LG+S  G GEH++VRI K G NT FVA+ LAK  
Sbjct: 7   LTYLHGKPLGQGLLKASPEDFLVVEDLGFSPDGEGEHVLVRILKNGCNTRFVADSLAKFL 66

Query: 68  GVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRHDKKLRPG 127
            + +R VS+AG KD+HAVTEQWL   +P  E PD S F  Q    ++LE  RH +KLR G
Sbjct: 67  KIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKF--QLEGCQVLEYARHKRKLRLG 124

Query: 128 DLQGNEFVVTLSEVSDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARRWGRDNVR 187
            L+GN+F + L EVS    V  RL+ + E GVPNYFG+QRFG  G+NL  A RW      
Sbjct: 125 ALKGNQFTLVLREVSARDDVEKRLQAIVEHGVPNYFGAQRFGIGGSNLQGALRWAESGAP 184

Query: 188 SRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGD-IALAEQQMFNV--DGDLALW 244
            R++N+RS +LSAARS +FNQ V  R+++  F + ++GD + LA +  + V    +L   
Sbjct: 185 VRDRNKRSFWLSAARSALFNQQVGIRLKKPEFNQVVDGDALQLAGRGSWFVADSEELTAL 244

Query: 245 DQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRRAIALK 304
             R+   E+ I+AAL G     +   AL  EQA +  E  L AL+   ++   RRA+ L 
Sbjct: 245 QARVDNRELMITAALVGSGDWGSQRGALAAEQAAVVEETQLQALLVREKVEAARRAMLLY 304

Query: 305 AQNLSWQVQED-QITLRFSLDAGSFATSLVRELI 337
            Q +SW   +D  + LRF L AGSFATS+VRELI
Sbjct: 305 PQQMSWNWWDDVTVELRFWLPAGSFATSVVRELI 338