Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., DNA primase from Pseudomonas syringae pv. syringae B728a

 Score =  478 bits (1230), Expect = e-139
 Identities = 269/652 (41%), Positives = 390/652 (59%), Gaps = 74/652 (11%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IP+SFIDDLL R DIVDV+ +RV+LKK GKNY+ACCPFH EKTPSFSVS +KQFY+
Sbjct: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGA GNA+ F+M+++ ++FP+A+E+LA   G+EV RE+        + T +      
Sbjct: 61  CFGCGAGGNALGFIMDHDNLDFPQAVEDLAKAAGMEVPREQSVKGQKPRQPTDS------ 114

Query: 121 RSLYDLMGSIAQFYRQQLKV-PANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNF 179
             LY L+ + A+FYRQ LK  P+ K A++YLK RGLSGEI + FG+G+    WD + ++ 
Sbjct: 115 -PLYPLLTAAAEFYRQALKSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLYKHL 173

Query: 180 GQQRSSEDMLVTAGMLIEN-DNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYL 238
                 + +++ AG+LIEN + G+RYDRFR RVMFPIRD RGRVI FGGR+     PKYL
Sbjct: 174 SSDSLQQKVMIDAGLLIENAETGKRYDRFRDRVMFPIRDSRGRVIAFGGRVLGDDKPKYL 233

Query: 239 NSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTG 298
           NSPETP+FHKG+ELYGL+E  +  R   +I+VVEGYMDV+ALAQ G+  +VA+LGT+T+ 
Sbjct: 234 NSPETPVFHKGQELYGLFEARKFNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSE 293

Query: 299 DHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVR 358
           +HL+ LFR   +V+ C+DGD+AGR+AAWRALE  LS L+ G   +FLFLP+GEDPD+ VR
Sbjct: 294 EHLKRLFRVVPNVLFCFDGDQAGRNAAWRALEATLSNLQDGRRARFLFLPEGEDPDTLVR 353

Query: 359 KYGKADFEQQV-ANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIP----- 412
             G   F+ ++  +A PL+ Y FE L +  + +  S EGK+ +  +A PLIDK+P     
Sbjct: 354 SEGTDAFKARINQHAQPLADYFFEQLTK--ESDPRSLEGKAHMATLAAPLIDKVPGANLR 411

Query: 413 ---------------------------------DPFLQ----------------EILEKL 423
                                            DP++                 E  ++ 
Sbjct: 412 ILMRQRLTEITGLTGEAVSHLVQSAPAEAPPSYDPYVDYDAMPDFADYQPQGGYEPQQEW 471

Query: 424 LDERTG------FDHQLRRKKARKTENRPAPHKA--IKRTPMRDVIALLIQNPSYAELVP 475
             ++TG      +D++   KK ++ +  P   +       PM+  +  L+ +P  AE V 
Sbjct: 472 TQKKTGGQNQKKWDNKSWGKKGKRQDFEPRTPRVPTAVEPPMQAALRTLLHHPELAEKVE 531

Query: 476 DLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVED 535
           + +               ++E  ++ P++ + QL+  W  ++   LL  LA  E  +  D
Sbjct: 532 NASHFAAEDQSNAQLLVALIEARQKNPNLRSLQLIARWHGTEQGRLLRALAEKEWLIEAD 591

Query: 536 NQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLILKGLKA 587
           N E+ F D++  + A+  E+ +E+L +K R   LS EEK +L++L+ + + A
Sbjct: 592 NLEQQFFDTITSLSARQRERSLEHLISKARQTELSAEEKIQLRELLNRNVPA 643